RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CRBNQ96SW2 442 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 C11orf84Q9BUA3 381 aaPredicted RBP4.09□□□□□ -1.75
SLIRP-202ENST00000553981 C1QTNF3Q9BXJ4 246 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 ARHGAP39Q9C0H5 1083 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 GINM1Q9NU53 330 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 DDX41Q9UJV9 622 aaKnown RBP4.09□□□□□ -1.75
SLIRP-202ENST00000553981 LAS1LQ9Y4W2 734 aaKnown RBP4.09□□□□□ -1.75
SLIRP-202ENST00000553981 TRBV23OR9-2A0A075B6M9 112 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 C1QTNF3-AMACRE9PGA6 284 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 NPHS1O60500 1241 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 PDE8AO60658 829 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 PCCAP05165 728 aaPredicted RBP4.08□□□□□ -1.76
SLIRP-202ENST00000553981 ZNF20P17024 532 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 RPL13P26373 211 aaKnown RBP4.08□□□□□ -1.76
SLIRP-202ENST00000553981 THBS2P35442 1172 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 CCT4P50991 539 aaKnown RBP4.08□□□□□ -1.76
SLIRP-202ENST00000553981 CRHR2Q13324 411 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 COL9A2Q14055 689 aaPredicted RBP4.08□□□□□ -1.76
SLIRP-202ENST00000553981 EPHA10Q5JZY3 1008 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 MBLAC2Q68D91 279 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 ETV3LQ6ZN32 361 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 TTC9BQ8N6N2 239 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 ZNF513Q8N8E2 541 aaPredicted RBP4.08□□□□□ -1.76
SLIRP-202ENST00000553981 C19orf47Q8N9M1 422 aaKnown RBP4.08□□□□□ -1.76
SLIRP-202ENST00000553981 PLEKHO2Q8TD55 490 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 RCC1LQ96I51 464 aaKnown RBP4.08□□□□□ -1.76
SLIRP-202ENST00000553981 WNK4Q96J92 1243 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 LOXL4Q96JB6 756 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 PRMT6Q96LA8 375 aaPredicted RBP4.08□□□□□ -1.76
SLIRP-202ENST00000553981 C8orf49Q96NF6 230 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 SSBP3Q9BWW4 388 aaPredicted RBP4.08□□□□□ -1.76
SLIRP-202ENST00000553981 PRO3102Q9H379 93 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 BABAM1Q9NWV8 329 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 PTPN22Q9Y2R2 807 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 TRIM17Q9Y577 477 aa4.08□□□□□ -1.76
SLIRP-202ENST00000553981 MYH3P11055 1940 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 ECM29Q5VYK3 1845 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 MED23Q9ULK4 1368 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 XDHP47989 1333 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 CLRN2A0PK11 232 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 SGSM2O43147 1006 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 TAF5LO75529 589 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 SOX9P48436 509 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 GIPRP48546 466 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 FKBP1BP68106 108 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 PAK2Q13177 524 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 FAM26FQ5R3K3 315 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 STK32CQ86UX6 486 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 MIB1Q86YT6 1006 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 DCP2Q8IU60 420 aaKnown RBP4.07□□□□□ -1.76
SLIRP-202ENST00000553981 FAM43AQ8N2R8 423 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 FAM26EQ8N5C1 309 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 KYQ8NBH2 561 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 BRI3BPQ8WY22 251 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 DPF3Q92784 378 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 COPS5Q92905 334 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 ARMC5Q96C12 935 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 EYA3Q99504 573 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 MARCH2Q9P0N8 246 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 CLEC1BQ9P126 229 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 HDAC9Q9UKV0 1011 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 INVSQ9Y283 1065 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 MAP3K2Q9Y2U5 619 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 SUGT1Q9Y2Z0 365 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 PTCH2Q9Y6C5 1203 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 HTTP42858 3142 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 ALPK3Q96L96 1907 aa4.07□□□□□ -1.76
SLIRP-202ENST00000553981 PI4KAP2A4QPH2 592 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 MROH6A6NGR9 719 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 H0YGN5 161 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 CSF1RP07333 972 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 PLS3P13797 630 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 CHRNDQ07001 517 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 SCRN1Q12765 414 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 PKN2Q16513 984 aaKnown RBP4.06□□□□□ -1.76
SLIRP-202ENST00000553981 CFAP100Q494V2 611 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 PRR31Q5SQ13 230 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 STRIP1Q5VSL9 837 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 MCTP2Q6DN12 878 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 TTLL5Q6EMB2 1281 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 CD300LDQ6UXZ3 194 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 UBE2Q1Q7Z7E8 422 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 ANKRD18AQ8IVF6 992 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 LGI4Q8N135 537 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 PI4KAP1Q8N8J0 262 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 CCDC191Q8NCU4 936 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 SH3TC2Q8TF17 1288 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 TSR2Q969E8 191 aaKnown RBP4.06□□□□□ -1.76
SLIRP-202ENST00000553981 KAZALD1Q96I82 304 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 ZNF333Q96JL9 665 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 MMP19Q99542 508 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 DEFB129Q9H1M3 183 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 PCDH18Q9HCL0 1135 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 CD209Q9NNX6 404 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 GPRC5CQ9NQ84 441 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 DBF4Q9UBU7 674 aaPredicted RBP4.06□□□□□ -1.76
SLIRP-202ENST00000553981 APEX2Q9UBZ4 518 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 AKT3Q9Y243 479 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 EFR3BQ9Y2G0 817 aa4.06□□□□□ -1.76
SLIRP-202ENST00000553981 KIAA0100Q14667 2235 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms