RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 NBPF20Q3BBV1 942 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 CDKAL1Q5VV42 579 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 SARM1Q6SZW1 724 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 HS2ST1Q7LGA3 356 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 RHPN2Q8IUC4 686 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 ARRDC4Q8NCT1 418 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 GOLGA5Q8TBA6 731 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 PPP1R13LQ8WUF5 828 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 ANP32BQ92688 251 aaKnown RBP12.92□□□□□ -0.34
NEK9-202ENST00000553823 MAP7D2Q96T17 732 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 TSEN34Q9BSV6 310 aaKnown RBP12.92□□□□□ -0.34
NEK9-202ENST00000553823 GBP3Q9H0R5 595 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 TBX20Q9UMR3 447 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 AKT3Q9Y243 479 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 ZMYM2Q9UBW7 1377 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 SMIM35A0A1B0GVV1 85 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 MOXD2PA6NHM9 499 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 TGFB1I1O43294 461 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 GJB1P08034 283 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 SRGAP2CP0DJJ0 459 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 ATP1A3P13637 1013 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 EFNA5P52803 228 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 ACLYP53396 1101 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 SNRPFP62306 86 aaKnown RBP12.91□□□□□ -0.34
NEK9-202ENST00000553823 SPAG1Q07617 926 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 STRN3Q13033 797 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 HIC1Q14526 733 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 MTFR1Q15390 333 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 PKN2Q16513 984 aaKnown RBP12.91□□□□□ -0.34
NEK9-202ENST00000553823 HSP90AA4PQ58FG1 418 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 CDCA2Q69YH5 1023 aaPredicted RBP12.91□□□□□ -0.34
NEK9-202ENST00000553823 FBXO46Q6PJ61 603 aaPredicted RBP12.91□□□□□ -0.34
NEK9-202ENST00000553823 LRRC55Q6ZSA7 311 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 MAP4K3Q8IVH8 894 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 FAM114A1Q8IWE2 563 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 ZBTB8OSQ8IWT0 167 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 KIAA0319LQ8IZA0 1049 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 RNF149Q8NC42 400 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 C2orf40Q9H1Z8 148 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 TMEM134Q9H6X4 195 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 PAK6Q9NQU5 681 aaPredicted RBP12.91□□□□□ -0.34
NEK9-202ENST00000553823 CGNQ9P2M7 1197 aaKnown RBP12.91□□□□□ -0.34
NEK9-202ENST00000553823 GTF2IRD1Q9UHL9 959 aa12.91□□□□□ -0.34
NEK9-202ENST00000553823 PHLPP2Q6ZVD8 1323 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 K7ERI5 159 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 CETN3O15182 167 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 TREHO43280 583 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 AP5Z1O43299 807 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 VTNP04004 478 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 NR3C1P04150 777 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 CYP2C9P11712 490 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 CCL5P13501 91 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 NR2F2P24468 414 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 RPL13P26373 211 aaKnown RBP12.9□□□□□ -0.34
NEK9-202ENST00000553823 PTENP60484 403 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 ZNF200P98182 395 aaPredicted RBP12.9□□□□□ -0.34
NEK9-202ENST00000553823 CDC42EP1Q00587 391 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 FANCCQ00597 558 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 POU5F1BQ06416 359 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 NFIL3Q16649 462 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 FAM47CQ5HY64 1035 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 TAS1R3Q7RTX0 852 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 SESTD1Q86VW0 696 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 IRF2BP1Q8IU81 584 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 ZC3H3Q8IXZ2 948 aaKnown RBP12.9□□□□□ -0.34
NEK9-202ENST00000553823 ANKRD20A12PQ8NF67 263 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 VTI1AQ96AJ9 217 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 NLRP4Q96MN2 994 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 CEP63Q96MT8 703 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 TRIM5Q9C035 493 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 RNF208Q9H0X6 261 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 AGPAT3Q9NRZ7 376 aa12.9□□□□□ -0.34
NEK9-202ENST00000553823 MAGEC2Q9UBF1 373 aaPredicted RBP12.9□□□□□ -0.34
NEK9-202ENST00000553823 KCNJ18B7U540 433 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 CLIC2O15247 247 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 ADCY5O95622 1261 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 SERPINC1P01008 464 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 MYCP01106 439 aaPredicted RBP12.89□□□□□ -0.35
NEK9-202ENST00000553823 EEF1GP26641 437 aaKnown RBP12.89□□□□□ -0.35
NEK9-202ENST00000553823 PHKA2P46019 1235 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 ADAM9Q13443 819 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 MYBPC2Q14324 1141 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 KCNJ12Q14500 433 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 TCP11X2Q5H9J9 407 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 TAF2Q6P1X5 1199 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 RUFY4Q6ZNE9 571 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 FILIP1Q7Z7B0 1213 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 ZNF410Q86VK4 478 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 C12orf56Q8IXR9 622 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 EEF2KMTQ96G04 330 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 ZNF668Q96K58 619 aaPredicted RBP12.89□□□□□ -0.35
NEK9-202ENST00000553823 GLT1D1Q96MS3 346 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 DEFB118Q96PH6 123 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 NFKBIZQ9BYH8 718 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 CCDC113Q9H0I3 377 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 FAM49AQ9H0Q0 323 aaPredicted RBP12.89□□□□□ -0.35
NEK9-202ENST00000553823 IKZF4Q9H2S9 585 aa12.89□□□□□ -0.35
NEK9-202ENST00000553823 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
NEK9-202ENST00000553823 A0A087WZ62 844 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms