RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ARL8AQ96BM9 186 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 UIMC1Q96RL1 719 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 PCED1AQ9H1Q7 454 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 PCDHB6Q9Y5E3 794 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 FAM83GA6ND36 823 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 IPO13O94829 963 aaKnown RBP5.77□□□□□ -1.49
SCFD1-210ENST00000553693 PCDH8O95206 1070 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 LSP1P33241 339 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 KIR2DL3P43628 341 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 LSSP48449 732 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 MAN2A2P49641 1150 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 TUBA3CQ13748 450 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 CNGB1Q14028 1251 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-210ENST00000553693 ACAP1Q15027 740 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 FKBP15Q5T1M5 1219 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 SPTY2D1Q68D10 685 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-210ENST00000553693 TUBA3EQ6PEY2 450 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 TMPRSS6Q8IU80 811 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 CDYL2Q8N8U2 506 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 TARS2Q9BW92 718 aaKnown RBP5.77□□□□□ -1.49
SCFD1-210ENST00000553693 NCDNQ9UBB6 729 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 MSRAQ9UJ68 235 aa5.77□□□□□ -1.49
SCFD1-210ENST00000553693 MYPNQ86TC9 1320 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 PLSCR1O15162 318 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 TGM5O43548 720 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 NRP2O60462 931 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 NPEPPSP55786 919 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 IL2P60568 153 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 DGCR2P98153 550 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 KLF10Q13118 480 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 RRP1BQ14684 758 aaKnown RBP5.76□□□□□ -1.49
SCFD1-210ENST00000553693 CCDC178Q5BJE1 867 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 DALRD3Q5D0E6 543 aaKnown RBP5.76□□□□□ -1.49
SCFD1-210ENST00000553693 UNQ6494/PRO21346Q6UXR6 183 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 KIAA0907Q7Z7F0 614 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-210ENST00000553693 GSPT2Q8IYD1 628 aaKnown RBP5.76□□□□□ -1.49
SCFD1-210ENST00000553693 UNC5BQ8IZJ1 945 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 CMTM4Q8IZR5 234 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 ZNF610Q8N9Z0 462 aa5.76□□□□□ -1.49
SCFD1-210ENST00000553693 ZNF483Q8TF39 744 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-210ENST00000553693 GPR101Q96P66 508 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-210ENST00000553693 ENPP3O14638 875 aa5.75□□□□□ -1.49
SCFD1-210ENST00000553693 PEX11BO96011 259 aa5.75□□□□□ -1.49
SCFD1-210ENST00000553693 XPAP23025 273 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-210ENST00000553693 GPR15P49685 360 aa5.75□□□□□ -1.49
SCFD1-210ENST00000553693 SPIDRQ14159 915 aa5.75□□□□□ -1.49
SCFD1-210ENST00000553693 PCBP1Q15365 356 aaKnown RBP eCLIP5.75□□□□□ -1.49
SCFD1-210ENST00000553693 SEPT7Q16181 437 aaKnown RBP5.75□□□□□ -1.49
SCFD1-210ENST00000553693 PPP1R14CQ8TAE6 165 aa5.75□□□□□ -1.49
SCFD1-210ENST00000553693 WNT8AQ9H1J5 351 aa5.75□□□□□ -1.49
SCFD1-210ENST00000553693 CEP72Q9P209 647 aa5.75□□□□□ -1.49
SCFD1-210ENST00000553693 A0A0A6YYK5 440 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-210ENST00000553693 ELL2O00472 640 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-210ENST00000553693 NARSO43776 548 aaKnown RBP5.74□□□□□ -1.49
SCFD1-210ENST00000553693 MFAP3LO75121 409 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 ADH4P08319 380 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 GAAP10253 952 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 SCNN1GP51170 649 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 NRG3P56975 720 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 HNRNPA0Q13151 305 aaKnown RBP5.74□□□□□ -1.49
SCFD1-210ENST00000553693 FHL2Q14192 279 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 TERF2Q15554 542 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 Q6ZRM9 215 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 NOP9Q86U38 636 aaKnown RBP5.74□□□□□ -1.49
SCFD1-210ENST00000553693 AMER2Q8N7J2 671 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 RSAD2Q8WXG1 361 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 ZNF496Q96IT1 587 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-210ENST00000553693 ZNF512Q96ME7 567 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-210ENST00000553693 SOX7Q9BT81 388 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 GPR87Q9BY21 358 aa5.74□□□□□ -1.49
SCFD1-210ENST00000553693 HECAQ9UBI9 543 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-210ENST00000553693 GSG1L2A8MUP6 293 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 GOLGA6L6A8MZA4 724 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 RAB11FIP3O75154 756 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 ALDH1A2O94788 518 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 SEC24DO94855 1032 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-210ENST00000553693 FKBP9O95302 570 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 PFKMP08237 780 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 GNAT2P19087 354 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 MAKP20794 623 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 ADCYAP1R1P41586 468 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 TGFB2P61812 414 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 DDB1Q16531 1140 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 ZBTB41Q5SVQ8 909 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 LMBR1LQ6UX01 489 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 FRMD7Q6ZUT3 714 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 FKBP9P1Q75LS8 142 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 CXorf67Q86X51 503 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-210ENST00000553693 SPTLC3Q9NUV7 552 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 KCNG1Q9UIX4 513 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 ING1Q9UK53 422 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-210ENST00000553693 MAPRE3Q9UPY8 281 aa5.73□□□□□ -1.49
SCFD1-210ENST00000553693 PDE8AO60658 829 aa5.72□□□□□ -1.49
SCFD1-210ENST00000553693 DCAF17Q5H9S7 520 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-210ENST00000553693 IGFL4Q6B9Z1 124 aa5.72□□□□□ -1.49
SCFD1-210ENST00000553693 HTR3DQ70Z44 454 aa5.72□□□□□ -1.49
SCFD1-210ENST00000553693 APBB1IPQ7Z5R6 666 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-210ENST00000553693 GLB1L2Q8IW92 636 aa5.72□□□□□ -1.49
SCFD1-210ENST00000553693 MB21D1Q8N884 522 aa5.72□□□□□ -1.49
SCFD1-210ENST00000553693 MDGA1Q8NFP4 955 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms