RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 DUSP6Q16828 381 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 XKR9Q5GH70 373 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 DIS3L2Q8IYB7 885 aaKnown RBP16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 DYDC2Q96IM9 177 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 TCF25Q9BQ70 676 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 ENTPD7Q9NQZ7 604 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 RGL1Q9NZL6 768 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 CLEC1BQ9P126 229 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 WRAP73Q9P2S5 460 aaPredicted RBP16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 PCDHA12Q9UN75 941 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 PCDHGC5Q9Y5F6 944 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 USP34Q70CQ2 3546 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 BTBD18B2RXH4 712 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 DCXO43602 365 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 NEMFO60524 1076 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 ZNF623O75123 536 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 GLP2RO95838 553 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 CENPBP07199 599 aaPredicted RBP16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 ALDH7A1P49419 539 aaKnown RBP16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 CYP4A11Q02928 519 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 BMS1Q14692 1282 aaKnown RBP16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 EMC2Q15006 297 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 SAFBQ15424 915 aaKnown RBP eCLIP16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 PLPP4Q5VZY2 271 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 GLB1LQ6UWU2 654 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 KSR1Q8IVT5 923 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 SLC39A11Q8N1S5 342 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 PRPF31Q8WWY3 499 aaKnown RBP16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 PGBD4Q96DM1 585 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 MTRQ99707 1265 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 IFT122Q9HBG6 1241 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 AGPAT5Q9NUQ2 364 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 FAM105AQ9NUU6 356 aa16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 BARX2Q9UMQ3 279 aaPredicted RBP16.89■□□□□ 0.29
SDR39U1-205ENST00000553546 PER2O15055 1255 aa16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 JAK2O60674 1132 aa16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 LYPLA2O95372 231 aa16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 LAMTOR4Q0VGL1 99 aa16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 CTTNQ14247 550 aaKnown RBP16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 PCBP1Q15365 356 aaKnown RBP eCLIP16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 TPH2Q8IWU9 490 aa16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 ZNF579Q8NAF0 562 aaKnown RBP16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 TMEM143Q96AN5 459 aa16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 CCDC43Q96MW1 224 aaKnown RBP16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 EIF2AK1Q9BQI3 630 aaKnown RBP16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 TTC12Q9H892 705 aaPredicted RBP16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 LIMCH1Q9UPQ0 1083 aa16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 TRIOO75962 3097 aa16.88■□□□□ 0.29
SDR39U1-205ENST00000553546 C5orf42Q9H799 3197 aa16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 SLITRK3O94933 977 aa16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 SRGAP2CP0DJJ0 459 aa16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 PBX3P40426 434 aa16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 MXD4Q14582 209 aaPredicted RBP16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 SMC1AQ14683 1233 aaKnown RBP16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 TMEM184AQ6ZMB5 413 aa16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 TMC7Q7Z402 723 aa16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 FERMT3Q86UX7 667 aa16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 TMEM169Q96HH4 297 aa16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 PHOX2BQ99453 314 aa16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 LLPHQ9BRT6 129 aaKnown RBP16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 ANKEF1Q9NU02 776 aa16.87■□□□□ 0.29
SDR39U1-205ENST00000553546 ZC3H11AO75152 810 aaKnown RBP eCLIP16.86■□□□□ 0.293e-9■■■□□ 17.8
SDR39U1-205ENST00000553546 DGAT1O75907 488 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 ERLIN2O94905 339 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 FOSBP53539 338 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 BCAR1P56945 870 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 RNASELQ05823 741 aaKnown RBP16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 TFDP1Q14186 410 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 NOMO2Q5JPE7 1267 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 RNF149Q8NC42 400 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 URGCPQ8TCY9 931 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 HSD17B14Q9BPX1 270 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 KCNH6Q9H252 994 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 BMP2KQ9NSY1 1161 aaPredicted RBP16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 USP15Q9Y4E8 981 aaPredicted RBP16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 PCDHB2Q9Y5E7 798 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 CNTNAP2Q9UHC6 1331 aa16.86■□□□□ 0.29
SDR39U1-205ENST00000553546 CFAP54Q96N23 3096 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 SEC24BO95487 1268 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 HOXB8P17481 243 aaPredicted RBP16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 AXLP30530 894 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 TXKP42681 527 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 POU5F1BQ06416 359 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 NCBP1Q09161 790 aaKnown RBP16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 ORC2Q13416 577 aaPredicted RBP16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 CNNM3Q8NE01 707 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 LPPQ93052 612 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 MTMR9Q96QG7 549 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 TBC1D13Q9NVG8 400 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 KANSL3Q9P2N6 904 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 STK39Q9UEW8 545 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 INPP5FQ9Y2H2 1132 aa16.85■□□□□ 0.29
SDR39U1-205ENST00000553546 HIDE1A8MVS5 230 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 OFD1O75665 1012 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 XRCC6P12956 609 aaKnown RBP eCLIP16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 HMGN5P82970 282 aaKnown RBP16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 ST3GAL1Q11201 340 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 KCNC3Q14003 757 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 GIT2Q14161 759 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 HFE2Q6ZVN8 426 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms