RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 PIGSQ96S52 555 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 PRRX2Q99811 253 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 RIOX1Q9H6W3 641 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 AGO3Q9H9G7 860 aaKnown RBP8.4□□□□□ -1.06
ATXN3-219ENST00000553488 BARX2Q9UMQ3 279 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-219ENST00000553488 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
ATXN3-219ENST00000553488 USP15Q9Y4E8 981 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-219ENST00000553488 PCDHGC5Q9Y5F6 944 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 EP300Q09472 2414 aaPredicted RBP8.4□□□□□ -1.07
ATXN3-219ENST00000553488 NRIP1P48552 1158 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 MFAP1P55081 439 aaKnown RBP8.39□□□□□ -1.07
ATXN3-219ENST00000553488 SIGLEC14Q08ET2 396 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 KCNMA1Q12791 1236 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 ELOAQ14241 798 aaKnown RBP8.39□□□□□ -1.07
ATXN3-219ENST00000553488 GRM4Q14833 912 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 NAALADL2Q58DX5 795 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 MARCH8Q5T0T0 291 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 IFIT1BQ5T764 474 aaKnown RBP8.39□□□□□ -1.07
ATXN3-219ENST00000553488 UTP14CQ5TAP6 766 aaKnown RBP8.39□□□□□ -1.07
ATXN3-219ENST00000553488 CYB5R4Q7L1T6 521 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 RTN4RL1Q86UN2 441 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-219ENST00000553488 HOMER1Q86YM7 354 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 SUGP1Q8IWZ8 645 aaKnown RBP8.39□□□□□ -1.07
ATXN3-219ENST00000553488 KLHL23Q8NBE8 558 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 VN1R2Q8NFZ6 395 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 SENP7Q9BQF6 1050 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 DSCC1Q9BVC3 393 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 IL25Q9H293 177 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 FAM86C1Q9NVL1 165 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 TUBE1Q9UJT0 475 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 ZNF232Q9UNY5 417 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 CDY2AQ9Y6F7 541 aa8.39□□□□□ -1.07
ATXN3-219ENST00000553488 CEP250Q9BV73 2442 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 OIP5O43482 229 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 KCNA2P16389 499 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 ATF7P17544 494 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-219ENST00000553488 WEE1P30291 646 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 CD52P31358 61 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 TCF7P36402 384 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-219ENST00000553488 GATMP50440 423 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 MRPS6P82932 125 aaKnown RBP8.38□□□□□ -1.07
ATXN3-219ENST00000553488 RBM10P98175 930 aaKnown RBP8.38□□□□□ -1.07
ATXN3-219ENST00000553488 SP4Q02446 784 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 PPFIA1Q13136 1202 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 HDAC1Q13547 482 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-219ENST00000553488 GRIK4Q16099 956 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 PCNX4Q63HM2 1172 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 NPAS4Q8IUM7 802 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 ATP8B4Q8TF62 1192 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 POF1BQ8WVV4 589 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 SCG3Q8WXD2 468 aaKnown RBP8.38□□□□□ -1.07
ATXN3-219ENST00000553488 PPP2R3CQ969Q6 453 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 ZBTB10Q96DT7 871 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 UBAC1Q9BSL1 405 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 PHF7Q9BWX1 381 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-219ENST00000553488 OXCT2Q9BYC2 517 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-219ENST00000553488 KRT23Q9C075 422 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 PHACTR1Q9C0D0 580 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 RTEL1Q9NZ71 1219 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
ATXN3-219ENST00000553488 MYH9P35579 1960 aaKnown RBP8.38□□□□□ -1.07
ATXN3-219ENST00000553488 IGSF9BQ9UPX0 1349 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 PNMA6FA0A0J9YX94 578 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 GSTTP1A0A1W2PQM5 241 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 ATP9AO75110 1047 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 PDGFBP01127 241 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-219ENST00000553488 RFX1P22670 979 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 TROAPQ12815 778 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 KCNC3Q14003 757 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 PTPN21Q16825 1174 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 IMMTQ16891 758 aaKnown RBP8.37□□□□□ -1.07
ATXN3-219ENST00000553488 PAN2Q504Q3 1202 aaKnown RBP8.37□□□□□ -1.07
ATXN3-219ENST00000553488 CWC27Q6UX04 472 aaKnown RBP8.37□□□□□ -1.07
ATXN3-219ENST00000553488 DNAJB3Q8WWF6 145 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 RILPL2Q969X0 211 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 LNPKQ9C0E8 428 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 TMX1Q9H3N1 280 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 CNNM2Q9H8M5 875 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 SQORQ9Y6N5 450 aa8.37□□□□□ -1.07
ATXN3-219ENST00000553488 CACNA1BQ00975 2339 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 KDM3AQ9Y4C1 1321 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 NCOR2Q9Y618 2525 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 C2orf16Q68DN1 1984 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 DCDC2BA2VCK2 349 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 PROB1E7EW31 1015 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 MEIS2O14770 477 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 FSCN2O14926 492 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 SCG2P13521 617 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 ITGB5P18084 799 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 MARK3P27448 753 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 AVPR2P30518 371 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 TRAF1Q13077 416 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 DUSP6Q16828 381 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 XRRA1Q6P2D8 792 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 USP17L6PQ6QN14 398 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 LRRC69Q6ZNQ3 347 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 RBM23Q86U06 439 aaKnown RBP8.36□□□□□ -1.07
ATXN3-219ENST00000553488 RSPH3Q86UC2 560 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 ALDH16A1Q8IZ83 802 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms