RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 GSPT2Q8IYD1 628 aaKnown RBP14.01□□□□□ -0.17
SHMT2-205ENST00000553474 DAW1Q8N136 415 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 CLEC4DQ8WXI8 215 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 CTNNBL1Q8WYA6 563 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-205ENST00000553474 KRT12Q99456 494 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 ISCUQ9H1K1 167 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 AGO4Q9HCK5 861 aaKnown RBP14.01□□□□□ -0.17
SHMT2-205ENST00000553474 EPB41L5Q9HCM4 733 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 EHD2Q9NZN4 543 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 STXBP5LQ9Y2K9 1186 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 ZHX2Q9Y6X8 837 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 PFASO15067 1338 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 K7ENM7 598 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 GLI1P08151 1106 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 ZBTB48P10074 688 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-205ENST00000553474 RARRES1P49788 294 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 CYP2J2P51589 502 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 GTF2BQ00403 316 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 GUCY2DQ02846 1103 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 ENPEPQ07075 957 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 TKFCQ3LXA3 575 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 MAATS1Q7Z4T9 603 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 RHOT2Q8IXI1 618 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 GLIS2Q9BZE0 524 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-205ENST00000553474 TSPYL1Q9H0U9 437 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 SLC38A10Q9HBR0 1119 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 SMARCAL1Q9NZC9 954 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 AMFRQ9UKV5 643 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 ANKRD62A6NC57 917 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 BHMG1C9JSJ3 638 aaPredicted RBP14□□□□□ -0.17
SHMT2-205ENST00000553474 ZBTB39O15060 712 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 MAFGO15525 162 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 ABCD1P33897 745 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 GALCP54803 685 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 UBXN2AP68543 259 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 KRT76Q01546 638 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 MTMR1Q13613 665 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 CBWD6Q4V339 395 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 CBWD3Q5JTY5 395 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 CBWD5Q5RIA9 395 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 DAAM2Q86T65 1068 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 NT5DC3Q86UY8 548 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 IQCKQ8N0W5 287 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 ZNF784Q8NCA9 323 aaPredicted RBP14□□□□□ -0.17
SHMT2-205ENST00000553474 BANK1Q8NDB2 785 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 CCDC26Q8TAB7 109 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 U2AF1L4Q8WU68 220 aaKnown RBP14□□□□□ -0.17
SHMT2-205ENST00000553474 ZC3H15Q8WU90 426 aaKnown RBP14□□□□□ -0.17
SHMT2-205ENST00000553474 GDAP1L1Q96MZ0 367 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 ZNF341Q9BYN7 854 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 GPR88Q9GZN0 384 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 CARD9Q9H257 536 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 C17orf75Q9HAS0 396 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 ANKEF1Q9NU02 776 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 FBXO28Q9NVF7 368 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 TCEAL9Q9UHQ7 104 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 AJAP1Q9UKB5 411 aaPredicted RBP14□□□□□ -0.17
SHMT2-205ENST00000553474 EXOC7Q9UPT5 735 aa14□□□□□ -0.17
SHMT2-205ENST00000553474 PHF20L1A8MW92 1017 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 CEP104O60308 925 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 CARSP49589 748 aaKnown RBP13.99□□□□□ -0.17
SHMT2-205ENST00000553474 VAMP7P51809 220 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 COG2Q14746 738 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 ZYXQ15942 572 aaKnown RBP13.99□□□□□ -0.17
SHMT2-205ENST00000553474 CFAP58Q5T655 872 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 EMC10Q5UCC4 262 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 MIGA2Q7L4E1 593 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 METTL13Q8N6R0 699 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 XXYLT1Q8NBI6 393 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 LMO3Q8TAP4 145 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 LNX1Q8TBB1 728 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-205ENST00000553474 LRRC45Q96CN5 670 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 HOOK2Q96ED9 719 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 AGBL1Q96MI9 1066 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 CCDC43Q96MW1 224 aaKnown RBP13.99□□□□□ -0.17
SHMT2-205ENST00000553474 PACSIN2Q9UNF0 486 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-205ENST00000553474 TRPM7Q96QT4 1865 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 TMCO5BA8MYB1 307 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 RAD51CO43502 376 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
SHMT2-205ENST00000553474 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.17
SHMT2-205ENST00000553474 PPFIA4O75335 1185 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 TNFAIP3P21580 790 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 YWHABP31946 246 aaKnown RBP13.99□□□□□ -0.17
SHMT2-205ENST00000553474 INPP5BP32019 993 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 HSPA9P38646 679 aaKnown RBP13.99□□□□□ -0.17
SHMT2-205ENST00000553474 NCKAP1LP55160 1127 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 PSMC5P62195 406 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 PPATQ06203 517 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 GJB7Q6PEY0 223 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 USP37Q86T82 979 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 GLYCTKQ8IVS8 523 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 OLIG1Q8TAK6 271 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 SYTL5Q8TDW5 730 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-205ENST00000553474 MORC4Q8TE76 937 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 NFU1Q9UMS0 254 aa13.99□□□□□ -0.17
SHMT2-205ENST00000553474 OTOFQ9HC10 1997 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 PARP14Q460N5 1801 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 MIF4GDA9UHW6 222 aaKnown RBP13.98□□□□□ -0.17
SHMT2-205ENST00000553474 WDR64B1ANS9 1081 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms