RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 LRFN2Q9ULH4 789 aa21.43■■□□□ 1.02
PTCH1-227ENST00000553256 PLAGL2Q9UPG8 496 aa21.43■■□□□ 1.02
PTCH1-227ENST00000553256 KIAA1024Q9UPX6 916 aa21.43■■□□□ 1.02
PTCH1-227ENST00000553256 TBKBP1A7MCY6 615 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 TSPAN1O60635 241 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 ITGB1P05556 798 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 PTPAQ15257 358 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 PCBP1Q15365 356 aaKnown RBP eCLIP21.42■■□□□ 1.02
PTCH1-227ENST00000553256 NAALADL2Q58DX5 795 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 CATSPER4Q7RTX7 472 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 MRPL10Q7Z7H8 261 aaKnown RBP21.42■■□□□ 1.02
PTCH1-227ENST00000553256 MCPH1Q8NEM0 835 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 SPPL3Q8TCT6 385 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 SNX29Q8TEQ0 813 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 LRRC15Q8TF66 581 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 FAM105AQ9NUU6 356 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 DDX19AQ9NUU7 478 aaKnown RBP21.42■■□□□ 1.02
PTCH1-227ENST00000553256 PIN4Q9Y237 131 aaKnown RBP21.42■■□□□ 1.02
PTCH1-227ENST00000553256 STK24Q9Y6E0 443 aa21.42■■□□□ 1.02
PTCH1-227ENST00000553256 PDCP20941 246 aa21.41■■□□□ 1.02
PTCH1-227ENST00000553256 GRIN1Q05586 938 aa21.41■■□□□ 1.02
PTCH1-227ENST00000553256 DAW1Q8N136 415 aa21.41■■□□□ 1.02
PTCH1-227ENST00000553256 C11orf84Q9BUA3 381 aaPredicted RBP21.41■■□□□ 1.02
PTCH1-227ENST00000553256 BHMT2Q9H2M3 363 aa21.41■■□□□ 1.02
PTCH1-227ENST00000553256 E9PMD0 336 aa21.4■■□□□ 1.02
PTCH1-227ENST00000553256 EYA4O95677 639 aa21.4■■□□□ 1.02
PTCH1-227ENST00000553256 AGMOQ6ZNB7 445 aa21.4■■□□□ 1.02
PTCH1-227ENST00000553256 KLHL23Q8NBE8 558 aa21.4■■□□□ 1.02
PTCH1-227ENST00000553256 RAB34Q9BZG1 259 aa21.4■■□□□ 1.02
PTCH1-227ENST00000553256 LMAN2LQ9H0V9 348 aa21.4■■□□□ 1.02
PTCH1-227ENST00000553256 FZD8Q9H461 694 aa21.4■■□□□ 1.02
PTCH1-227ENST00000553256 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.39■■□□□ 1.01
PTCH1-227ENST00000553256 HOXA2O43364 376 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 MAPK7Q13164 816 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 TFDP1Q14186 410 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 SF3A1Q15459 793 aaKnown RBP21.39■■□□□ 1.01
PTCH1-227ENST00000553256 TMEM119Q4V9L6 283 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 KRT79Q5XKE5 535 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 PPP4R3CPQ6ZMV5 832 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 C1orf186Q6ZWK4 172 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 MICALL1Q8N3F8 863 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 SMG8Q8ND04 991 aaKnown RBP21.39■■□□□ 1.01
PTCH1-227ENST00000553256 ATXN2LQ8WWM7 1075 aaKnown RBP21.39■■□□□ 1.01
PTCH1-227ENST00000553256 LPPQ93052 612 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 CCDC113Q9H0I3 377 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 THEGQ9P2T0 379 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 PCDHB2Q9Y5E7 798 aa21.39■■□□□ 1.01
PTCH1-227ENST00000553256 MORC2Q9Y6X9 1032 aaPredicted RBP21.39■■□□□ 1.01
PTCH1-227ENST00000553256 VPS37CA5D8V6 355 aaPredicted RBP21.38■■□□□ 1.01
PTCH1-227ENST00000553256 ARHGEF35A5YM69 484 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 VWA3AA6NCI4 1184 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 TTLL13PA6NNM8 815 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 INPPL1O15357 1258 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 OFD1O75665 1012 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 EDN1P05305 212 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 ARF4P18085 180 aaPredicted RBP21.38■■□□□ 1.01
PTCH1-227ENST00000553256 RAB27AP51159 221 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 FAM187BQ17R55 369 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 TWF2Q6IBS0 349 aaKnown RBP21.38■■□□□ 1.01
PTCH1-227ENST00000553256 FAM173BQ6P4H8 233 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 MAEAQ7L5Y9 396 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 KCTD17Q8N5Z5 321 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 COLGALT1Q8NBJ5 622 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 ALG13Q9NP73 1137 aaKnown RBP21.38■■□□□ 1.01
PTCH1-227ENST00000553256 CLIC4Q9Y696 253 aa21.38■■□□□ 1.01
PTCH1-227ENST00000553256 B4GALT5O43286 388 aa21.37■■□□□ 1.01
PTCH1-227ENST00000553256 B4GALT3O60512 393 aa21.37■■□□□ 1.01
PTCH1-227ENST00000553256 IBSPP21815 317 aaPredicted RBP21.37■■□□□ 1.01
PTCH1-227ENST00000553256 AXLP30530 894 aa21.37■■□□□ 1.01
PTCH1-227ENST00000553256 AFF1P51825 1210 aaKnown RBP21.37■■□□□ 1.01
PTCH1-227ENST00000553256 PTPROQ16827 1216 aa21.37■■□□□ 1.01
PTCH1-227ENST00000553256 HELQQ8TDG4 1101 aa21.37■■□□□ 1.01
PTCH1-227ENST00000553256 CCDC51Q96ER9 411 aa21.37■■□□□ 1.01
PTCH1-227ENST00000553256 AK8Q96MA6 479 aa21.37■■□□□ 1.01
PTCH1-227ENST00000553256 RUSC1Q9BVN2 902 aa21.37■■□□□ 1.01
PTCH1-227ENST00000553256 EIF2AQ9BY44 585 aaKnown RBP21.37■■□□□ 1.01
PTCH1-227ENST00000553256 POLD4Q9HCU8 107 aa21.37■■□□□ 1.01
PTCH1-227ENST00000553256 FOXD4L1Q9NU39 408 aa21.37■■□□□ 1.01
PTCH1-227ENST00000553256 A0A1B0GUA9 196 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 SLC26A4O43511 780 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 BMP15O95972 392 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 SKIP12755 728 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 NCLP19338 710 aaKnown RBP21.36■■□□□ 1.01
PTCH1-227ENST00000553256 IRS1P35568 1242 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 NAMPTP43490 491 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 PLCB3Q01970 1234 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 TFF2Q03403 129 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 TCEAL5Q5H9L2 206 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 RINT1Q6NUQ1 792 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 LRRC43Q8N309 656 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 RSPH1Q8WYR4 309 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 CCDC43Q96MW1 224 aaKnown RBP21.36■■□□□ 1.01
PTCH1-227ENST00000553256 ASB2Q96Q27 587 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 RNF39Q9H2S5 420 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 DNM3Q9UQ16 869 aa21.36■■□□□ 1.01
PTCH1-227ENST00000553256 PLXNA4Q9HCM2 1894 aa21.35■■□□□ 1.01
PTCH1-227ENST00000553256 INO80B-WBP1J3KQ70 363 aa21.35■■□□□ 1.01
PTCH1-227ENST00000553256 STX6O43752 255 aa21.35■■□□□ 1.01
PTCH1-227ENST00000553256 SLC12A3P55017 1021 aa21.35■■□□□ 1.01
PTCH1-227ENST00000553256 CTC1Q2NKJ3 1217 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms