RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SLC24A5Q71RS6 500 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 MAEAQ7L5Y9 396 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 CATSPER4Q7RTX7 472 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 TMCO2Q7Z6W1 182 aaPredicted RBP12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 RTN4RL1Q86UN2 441 aaPredicted RBP12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 CRIPAKQ8N1N5 446 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 BSNDQ8WZ55 320 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 LARP4BQ92615 738 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 RAD54LQ92698 747 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 PLIN2Q99541 437 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 RAD9AQ99638 391 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 ZBED2Q9BTP6 218 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 C2orf40Q9H1Z8 148 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 NKX2-4Q9H2Z4 354 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 MINDY3Q9H8M7 445 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 CHST12Q9NRB3 414 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 DACT1Q9NYF0 836 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 PIN4Q9Y237 131 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 INSL6Q9Y581 213 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 PLXNA4Q9HCM2 1894 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 ADGRA3Q8IWK6 1321 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 ERLIN2O94905 339 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 CA3P07451 260 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 STAG3L1P0CL83 205 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 NCLP19338 710 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 ME1P48163 572 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 MAPK7Q13164 816 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 DMP1Q13316 513 aaPredicted RBP12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 PPP2R2DQ66LE6 453 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 CCDC73Q6ZRK6 1079 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 GPBP1Q86WP2 473 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 ZBTB8OSQ8IWT0 167 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 DAW1Q8N136 415 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 IFT74Q96LB3 600 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 YME1L1Q96TA2 773 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 ELAC1Q9H777 363 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 C17orf75Q9HAS0 396 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 SLC28A3Q9HAS3 691 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 RCOR1Q9UKL0 485 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 ODF2LQ9ULJ1 636 aa12.96□□□□□ -0.33
TRAFD1-209ENST00000552896 PHLPP2Q6ZVD8 1323 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 CNTNAP2Q9UHC6 1331 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 INO80B-WBP1J3KQ70 363 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 TSPAN1O60635 241 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 UPP2O95045 317 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 MYOGP15173 224 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 AXLP30530 894 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 STAT6P42226 847 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 RAB27AP51159 221 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 EFNA5P52803 228 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 MCM6Q14566 821 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 AMHR2Q16671 573 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 FAM117BQ6P1L5 589 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 DEFB123Q8N688 67 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 DEPTORQ8TB45 409 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 CCDC51Q96ER9 411 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 SPATA32Q96LK8 384 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 PRIMPOLQ96LW4 560 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 CCDC113Q9H0I3 377 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 TTYH1Q9H313 450 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 TMEM161AQ9NX61 479 aa12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-209ENST00000552896 A0A087X0B3 334 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 A0A0U1RQF3 1178 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 LCHNA4D1U4 455 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 DGKIO75912 1065 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 SKIP12755 728 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 TAP1Q03518 808 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 FAM187BQ17R55 369 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 NAALADL2Q58DX5 795 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 RRAGBQ5VZM2 374 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 TWF2Q6IBS0 349 aaKnown RBP12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 NOTUMQ6P988 496 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 SHC4Q6S5L8 630 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 ZNF689Q96CS4 500 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 REEP2Q9BRK0 252 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 SCAND2PQ9GZW5 306 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 PRMT7Q9NVM4 692 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 LRFN2Q9ULH4 789 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 PCDHA7Q9UN72 937 aa12.94□□□□□ -0.34
TRAFD1-209ENST00000552896 LINC01553A4QN01 128 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 HOXA2O43364 376 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 ARHGEF15O94989 841 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 PLS3P13797 630 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 ATF7P17544 494 aaPredicted RBP12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 HOXA11P31270 313 aaPredicted RBP12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 NPTX2P47972 431 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 ZNF131P52739 623 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 FAM189BP81408 668 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 NCBP1Q09161 790 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 RAD51AP2Q09MP3 1159 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 E2F4Q16254 413 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms