RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 FBXO4Q9UKT5 387 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 CLUHO75153 1309 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 DCDC2BA2VCK2 349 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 E7EWF7 191 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 LILRB5O75023 590 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 LRRN2O75325 713 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 RFX1P22670 979 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 KLRC2P26717 231 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 GBP2P32456 591 aaPredicted RBP12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 PHKA2P46019 1235 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 SLC11A1P49279 550 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 GNAQP50148 359 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 GPC3P51654 580 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 HTR4Q13639 388 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 DCLRE1AQ6PJP8 1040 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 ZBTB44Q8NCP5 570 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 ZNF707Q96C28 371 aaPredicted RBP12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 MYL10Q9BUA6 226 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 DDX23Q9BUQ8 820 aaKnown RBP12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 EMILIN2Q9BXX0 1053 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 DACT1Q9NYF0 836 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 NCDNQ9UBB6 729 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 DNAJB4Q9UDY4 337 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 PCDHGA2Q9Y5H1 932 aa12.89□□□□□ -0.35
SUPT16H-202ENST00000552829 FASNP49327 2511 aaKnown RBP12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 CCDC195A0A1B0GUA6 201 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 OFD1O75665 1012 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 FGFR4P22455 802 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 LMNB2Q03252 620 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 NOMO2Q5JPE7 1267 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 EFCAB12Q6NXP0 572 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 MIS18BP1Q6P0N0 1132 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 CMTR1Q8N1G2 835 aaKnown RBP12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 NCOA7Q8NI08 942 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 STAMQ92783 540 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 EPC1Q9H2F5 836 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 MAN1C1Q9NR34 630 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 CHST12Q9NRB3 414 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 STK39Q9UEW8 545 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 AKT3Q9Y243 479 aa12.88□□□□□ -0.35
SUPT16H-202ENST00000552829 F5P12259 2224 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 hCG_1642624A0A1W2PR95 340 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 MEIS3P2A8K0S8 358 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 DDX39AO00148 427 aaKnown RBP12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 ZNF623O75123 536 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 EFEMP2O95967 443 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 FOSP01100 380 aaPredicted RBP12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 LAMP2P13473 410 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 SREBF1P36956 1147 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 PTH1RQ03431 593 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 TYW1BQ6NUM6 668 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 RALYLQ86SE5 291 aaKnown RBP12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 ZNF280BQ86YH2 543 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 SMC5Q8IY18 1101 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 LRRC71Q8N4P6 559 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 LPPQ93052 612 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 PGBD1Q96JS3 809 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 ZNF668Q96K58 619 aaPredicted RBP12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 MAP7D2Q96T17 732 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 MTA3Q9BTC8 594 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 ANO3Q9BYT9 981 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 OSBPL6Q9BZF3 934 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 PARD6AQ9NPB6 346 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 RIC8AQ9NPQ8 531 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 WDR70Q9NW82 654 aa12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 CDV3Q9UKY7 258 aaKnown RBP12.87□□□□□ -0.35
SUPT16H-202ENST00000552829 COL4A3Q01955 1670 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 RALGAPA1Q6GYQ0 2036 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 IGLV3-22A0A075B6J6 115 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 FAM86B1E9PN63 330 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 INPPL1O15357 1258 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 CSDE1O75534 798 aaKnown RBP12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 C1RP00736 705 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 FAM86B2P0C5J1 330 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 TMOD1P28289 359 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 TMEM132AQ24JP5 1023 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 ZNF746Q6NUN9 644 aaPredicted RBP12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 GLB1LQ6UWU2 654 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 CKAP2LQ8IYA6 745 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 HDAC7Q8WUI4 952 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 CRYGNQ8WXF5 182 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 SMG7Q92540 1137 aaKnown RBP12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 SHDQ96IW2 340 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 RPS6KC1Q96S38 1066 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 RXFP1Q9HBX9 757 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 MRPL17Q9NRX2 175 aaKnown RBP12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 ZSCAN32Q9NX65 697 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 CEP131Q9UPN4 1083 aa12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 SMG5Q9UPR3 1016 aaKnown RBP12.86□□□□□ -0.35
SUPT16H-202ENST00000552829 KANSL1LA0AUZ9 987 aa12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 IPO5O00410 1097 aaKnown RBP12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 TEX28O15482 410 aa12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 ZNF862O60290 1169 aa12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 RFPL2O75678 378 aa12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 DDHD2O94830 711 aa12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 SSBP05455 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms