RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 GBP1P32455 592 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 USP14P54578 494 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 CHMP4BP1P59074 171 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 HERVK_113P62684 666 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 LACTBP83111 547 aaPredicted RBP6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 PABPC4Q13310 644 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 IMMTQ16891 758 aaKnown RBP6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 CATSPERGQ6ZRH7 1159 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 MFSD6Q6ZSS7 791 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 CYB5R4Q7L1T6 521 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 CTU1Q7Z7A3 348 aaKnown RBP6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 REXO1Q8N1G1 1221 aaKnown RBP6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 BAHD1Q8TBE0 780 aaPredicted RBP6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 STAG1Q8WVM7 1258 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 NKD1Q969G9 470 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 Q96M66 194 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 KIF2CQ99661 725 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 MCOLN1Q9GZU1 580 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 VCPKMTQ9H867 229 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 EHMT1Q9H9B1 1298 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 PRDM7Q9NQW5 492 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 CTNNA3Q9UI47 895 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 KCNH3Q9ULD8 1083 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 ISY1Q9ULR0 285 aaKnown RBP6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 STX8Q9UNK0 236 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 SLC45A1Q9Y2W3 748 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 TRIM17Q9Y577 477 aa6.53□□□□□ -1.36
SMARCC2-213ENST00000552627 F5H6K3 240 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 SCAMP3O14828 347 aaKnown RBP6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 CNMDO75829 334 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 FLOT1O75955 427 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 TTLL1O95922 423 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 RAG1P15918 1043 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 ITGB5P18084 799 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 HOXA7P31268 230 aaPredicted RBP6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 PSMC4P43686 418 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 ZNF165P49910 485 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 CLCQ05315 142 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 KLRC3Q07444 240 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 ZNF394Q53GI3 561 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 ARSHQ5FYA8 562 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 SLFN13Q68D06 897 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 RCSD1Q6JBY9 416 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 GK5Q6ZS86 529 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 CHST3Q7LGC8 479 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 OTOP1Q7RTM1 612 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 ATG4DQ86TL0 474 aaPredicted RBP6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 SLITRK4Q8IW52 837 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 LRRN4CLQ8ND94 238 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 RNF141Q8WVD5 230 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 MAP4K1Q92918 833 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 ATG4CQ96DT6 458 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 ERO1AQ96HE7 468 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 EAF1Q96JC9 268 aaPredicted RBP6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 RNF41Q9H4P4 317 aaPredicted RBP6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 SH2D4AQ9H788 454 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 CARS2Q9HA77 564 aaKnown RBP6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 GMIPQ9P107 970 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 BTBD7Q9P203 1132 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 NYAP2Q9P242 653 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 RBPJLQ9UBG7 517 aa6.52□□□□□ -1.37
SMARCC2-213ENST00000552627 FRMPD2Q68DX3 1309 aaPredicted RBP6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 E7EWF7 191 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 RGS13O14921 159 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 SLC27A2O14975 620 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 WDR46O15213 610 aaKnown RBP6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 RRP9O43818 475 aaKnown RBP6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 RECKO95980 971 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 MCCP23508 829 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 GCLCP48506 637 aaPredicted RBP6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 SNAP25P60880 206 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 PRKCZQ05513 592 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 CCDC96Q2M329 555 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 CREB3L3Q68CJ9 461 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 CASC1Q6TDU7 716 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 KCTD1Q719H9 257 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 RGS22Q8NE09 1264 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 LPAR1Q92633 364 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 ESR2Q92731 530 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 MKL1Q969V6 931 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 MRRFQ96E11 262 aaKnown RBP6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 ASIC4Q96FT7 647 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 KREMEN1Q96MU8 473 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 TMEM47Q9BQJ4 181 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 PORCNQ9H237 461 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 TRIT1Q9H3H1 467 aaKnown RBP6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 MORF4L1Q9UBU8 362 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 GABRQQ9UN88 632 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 RNF114Q9Y508 228 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 PCDHGB7Q9Y5F8 929 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 PTCH2Q9Y6C5 1203 aa6.51□□□□□ -1.37
SMARCC2-213ENST00000552627 TNKSO95271 1327 aa6.5□□□□□ -1.37
SMARCC2-213ENST00000552627 MYPNQ86TC9 1320 aa6.5□□□□□ -1.37
SMARCC2-213ENST00000552627 DOCK3Q8IZD9 2030 aa6.5□□□□□ -1.37
SMARCC2-213ENST00000552627 TNPO2O14787 897 aaKnown RBP6.5□□□□□ -1.37
SMARCC2-213ENST00000552627 LRRN2O75325 713 aa6.5□□□□□ -1.37
SMARCC2-213ENST00000552627 GOLGA8HP0CJ92 632 aa6.5□□□□□ -1.37
SMARCC2-213ENST00000552627 TOP1P11387 765 aaKnown RBP6.5□□□□□ -1.37
SMARCC2-213ENST00000552627 SLC16A2P36021 539 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms