RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 C4orf19Q8IY42 314 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 TMEM169Q96HH4 297 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 RPGRIP1Q96KN7 1286 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 AIFM3Q96NN9 605 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 PIN4Q9Y237 131 aaKnown RBP18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 CNTNAP2Q9UHC6 1331 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 INPPL1O15357 1258 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 P4HBP07237 508 aaKnown RBP18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 RFC5P40937 340 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 NUBP1P53384 320 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 SPIRE1Q08AE8 756 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 BMS1Q14692 1282 aaKnown RBP18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 PCBP1Q15365 356 aaKnown RBP eCLIP18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 NOMO2Q5JPE7 1267 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 TWF2Q6IBS0 349 aaKnown RBP18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 GLB1LQ6UWU2 654 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 SRGAP1Q7Z6B7 1085 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 ALYREFQ86V81 257 aaKnown RBP18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 TMEM173Q86WV6 379 aaPredicted RBP18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 RNF169Q8NCN4 708 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 PRSS33Q8NF86 280 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 SLC7A3Q8WY07 619 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 PBXIP1Q96AQ6 731 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 IGSF21Q96ID5 467 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 NRDE2Q9H7Z3 1164 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 TBC1D13Q9NVG8 400 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 NR2E1Q9Y466 385 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 COL4A3BPQ9Y5P4 624 aa18.06■□□□□ 0.48
CALCOCO1-220ENST00000552282 CSDE1O75534 798 aaKnown RBP18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 OFD1O75665 1012 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 GALTP07902 379 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 MTHFRP42898 656 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 PTPN5P54829 565 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 SCRN1Q12765 414 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 KIAA1841Q6NSI8 718 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 RHPN2Q8IUC4 686 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 SUGP1Q8IWZ8 645 aaKnown RBP18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 HAS1Q92839 578 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 PGBD4Q96DM1 585 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 WRAP73Q9P2S5 460 aaPredicted RBP18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 USTQ9Y2C2 406 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 MYO15AQ9UKN7 3530 aa18.05■□□□□ 0.48
CALCOCO1-220ENST00000552282 DDX11L8A8MPP1 907 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 PFKFB2O60825 505 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 XBP1P17861 261 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 POU5F1BQ06416 359 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 EPHA7Q15375 998 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 LETM2Q2VYF4 491 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 PLA2G4FQ68DD2 849 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 CES5AQ6NT32 575 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 CATSPER4Q7RTX7 472 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 IFNLR1Q8IU57 520 aaPredicted RBP18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 VPS52Q8N1B4 723 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 SLC22A17Q8WUG5 538 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 PSPC1Q8WXF1 523 aaKnown RBP18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 SH2D3AQ9BRG2 576 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 TMEM175Q9BSA9 504 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 POMKQ9H5K3 350 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 PDRG1Q9NUG6 133 aa18.04■□□□□ 0.48
CALCOCO1-220ENST00000552282 CCDC194A0A1B0GVG4 234 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 ASAP2O43150 1006 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 ZC3H11AO75152 810 aaKnown RBP eCLIP18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 LYPLA2O95372 231 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 HOXA11P31270 313 aaPredicted RBP18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 ANAPC15P60006 121 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 LLGL2Q6P1M3 1020 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 AGMOQ6ZNB7 445 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 UBALD2Q8IYN6 164 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 ZDHHC14Q8IZN3 488 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 BCL7CQ8WUZ0 217 aaPredicted RBP18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 TNFRSF25Q93038 417 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 RIPOR3Q96MK2 946 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 NLRP4Q96MN2 994 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 LXNQ9BS40 222 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 VN1R3Q9BXE9 311 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 KCNJ14Q9UNX9 436 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 SORCS3Q9UPU3 1222 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 ZMYM2Q9UBW7 1377 aa18.03■□□□□ 0.48
CALCOCO1-220ENST00000552282 MEIS3P2A8K0S8 358 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 NT5C1B-RDH14C9J2C7 533 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 PAPLNO95428 1278 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 CXCL14O95715 111 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 EFEMP2O95967 443 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 NPEPPSP55786 919 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 TCF15Q12870 199 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 PTPN14Q15678 1187 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 UBXN11Q5T124 520 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 PPFIBP1Q86W92 1011 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 KSR1Q8IVT5 923 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 SLFN12Q8IYM2 578 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 RNF168Q8IYW5 571 aaPredicted RBP18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 CNNM3Q8NE01 707 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 TCP11Q8WWU5 503 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 LPPQ93052 612 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 CCDC51Q96ER9 411 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 CEP170P1Q96L14 293 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 RHOBTB2Q9BYZ6 727 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 KANSL3Q9P2N6 904 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 PCDHB2Q9Y5E7 798 aa18.02■□□□□ 0.48
CALCOCO1-220ENST00000552282 DMDP11532 3685 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms