RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PANK2Q9BZ23 570 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 POLR3FQ9H1D9 316 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-225ENST00000551845 IFT122Q9HBG6 1241 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 GPRC5CQ9NQ84 441 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 RGS18Q9NS28 235 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 C1orf112Q9NSG2 853 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 KCND2Q9NZV8 630 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 YBX2Q9Y2T7 364 aaKnown RBP11.77□□□□□ -0.53
PTCH1-225ENST00000551845 INSL6Q9Y581 213 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 PCDHA11Q9Y5I1 949 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 MYO9BQ13459 2157 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 MUC3AQ02505 3323 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 TLL1O43897 1013 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 GJB5O95377 273 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 PLCG1P19174 1290 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 RABGGTBP53611 331 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 DEFB103AP81534 67 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 PPP2R5AQ15172 486 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 PPP2R2DQ66LE6 453 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 FAM117BQ6P1L5 589 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 CCDC73Q6ZRK6 1079 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 C1orf186Q6ZWK4 172 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 USP49Q70CQ1 688 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 KCNK18Q7Z418 384 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 ASAP3Q8TDY4 903 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 TMX1Q9H3N1 280 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 POLD4Q9HCU8 107 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 DACT1Q9NYF0 836 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 LRFN2Q9ULH4 789 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 PCDHB7Q9Y5E2 793 aa11.76□□□□□ -0.53
PTCH1-225ENST00000551845 LRRIQ4A6NIV6 560 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 INO80B-WBP1J3KQ70 363 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 FGFR4P22455 802 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 GUCY2CP25092 1073 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 SLC12A3P55017 1021 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 FAM189BP81408 668 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 DHX8Q14562 1220 aaKnown RBP11.75□□□□□ -0.53
PTCH1-225ENST00000551845 ALYREFQ86V81 257 aaKnown RBP11.75□□□□□ -0.53
PTCH1-225ENST00000551845 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-225ENST00000551845 ZBTB8OSQ8IWT0 167 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 DEPTORQ8TB45 409 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 LARP4BQ92615 738 aaKnown RBP11.75□□□□□ -0.53
PTCH1-225ENST00000551845 RAD54LQ92698 747 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 SPATA32Q96LK8 384 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 DRC1Q96MC2 740 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 NFKBIZQ9BYH8 718 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 SCAND2PQ9GZW5 306 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-225ENST00000551845 C2orf40Q9H1Z8 148 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 C17orf75Q9HAS0 396 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 FAM13BQ9NYF5 915 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 PCDHA7Q9UN72 937 aa11.75□□□□□ -0.53
PTCH1-225ENST00000551845 KAT6AQ92794 2004 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 SFI1A8K8P3 1242 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 RBAK-RBAKDNI3L0D1 243 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-225ENST00000551845 HIP1RO75146 1068 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 ERLIN2O94905 339 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 KRT18P05783 430 aaKnown RBP11.74□□□□□ -0.53
PTCH1-225ENST00000551845 SKIP12755 728 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 NAMPTP43490 491 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 SARSP49591 514 aaKnown RBP11.74□□□□□ -0.53
PTCH1-225ENST00000551845 SMTNP53814 917 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 CAPSQ13938 189 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 MCM6Q14566 821 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 DSC3Q14574 896 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 AXDND1Q5T1B0 1012 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-225ENST00000551845 SV2BQ7L1I2 683 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 TMCO2Q7Z6W1 182 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-225ENST00000551845 YME1L1Q96TA2 773 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 RUSC1Q9BVN2 902 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 ELAC1Q9H777 363 aaKnown RBP11.74□□□□□ -0.53
PTCH1-225ENST00000551845 BLOC1S4Q9NUP1 217 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 LARSQ9P2J5 1176 aaKnown RBP11.74□□□□□ -0.53
PTCH1-225ENST00000551845 STK17AQ9UEE5 414 aa11.74□□□□□ -0.53
PTCH1-225ENST00000551845 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
PTCH1-225ENST00000551845 A0A0U1RQF3 1178 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 CCDC169A6NNP5 214 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 C9IYK1 514 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 K7ERI5 159 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 MGEA5O60502 916 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 EOMESO95936 686 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 MYOGP15173 224 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 IBSPP21815 317 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 AXLP30530 894 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 STAT6P42226 847 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 EFNA5P52803 228 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 PEX3P56589 373 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 HTRA4P83105 476 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 RAD51AP2Q09MP3 1159 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 DMP1Q13316 513 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 TRIP12Q14669 1992 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 MAPK6Q16659 721 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 ARSHQ5FYA8 562 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 ADALQ6DHV7 355 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 TWF2Q6IBS0 349 aaKnown RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 SHC4Q6S5L8 630 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 GPBP1Q86WP2 473 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 NPAS4Q8IUM7 802 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 PDILTQ8N807 584 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 IQUBQ8NA54 791 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms