RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 LRRC27Q9C0I9 530 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 DLGAP2Q9P1A6 1054 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
ERBB3-219ENST00000551242 TBK1Q9UHD2 729 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 PCDHA3Q9Y5H8 950 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 XIRP1Q702N8 1843 aaKnown RBP13.17□□□□□ -0.3
ERBB3-219ENST00000551242 PHF2O75151 1096 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 ENTPD5O75356 428 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 AKAP3O75969 853 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 RARGP13631 454 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 TNNI2P48788 182 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 CASP4P49662 377 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 PEX5P50542 639 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 JAM2P57087 298 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 PDIA5Q14554 519 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 EPHA7Q15375 998 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 MFSD5Q6N075 450 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 CCDC137Q6PK04 289 aaKnown RBP13.17□□□□□ -0.3
ERBB3-219ENST00000551242 VSIG1Q86XK7 387 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 CCDC65Q8IXS2 484 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 UCMAQ8WVF2 138 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 CTNNBL1Q8WYA6 563 aaPredicted RBP13.17□□□□□ -0.3
ERBB3-219ENST00000551242 ERP27Q96DN0 273 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 RAB3IPQ96QF0 476 aaPredicted RBP13.17□□□□□ -0.3
ERBB3-219ENST00000551242 THAP2Q9H0W7 228 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 ANKIB1Q9P2G1 1089 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 COL22A1Q8NFW1 1626 aaPredicted RBP13.17□□□□□ -0.3
ERBB3-219ENST00000551242 STRCQ7RTU9 1775 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 MARCH6O60337 910 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 LGR5O75473 907 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 WFS1O76024 890 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 KRT18P05783 430 aaKnown RBP13.17□□□□□ -0.3
ERBB3-219ENST00000551242 BRAFP15056 766 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 STX2P32856 288 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 PTDSS1P48651 473 aaKnown RBP13.17□□□□□ -0.3
ERBB3-219ENST00000551242 SESN3P58005 492 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 MRPS35P82673 323 aaKnown RBP13.17□□□□□ -0.3
ERBB3-219ENST00000551242 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 GALNT15Q8N3T1 639 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 PHC3Q8NDX5 983 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 CDC42EP4Q9H3Q1 356 aaKnown RBP13.17□□□□□ -0.3
ERBB3-219ENST00000551242 CYP39A1Q9NYL5 469 aa13.17□□□□□ -0.3
ERBB3-219ENST00000551242 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 POTECB2RU33 542 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 PPP2R5EQ16537 467 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 ZNF449Q6P9G9 518 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 CROCCP2Q86T23 111 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
ERBB3-219ENST00000551242 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 INTUQ9ULD6 942 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 GPR75-ASB3A0A0A6YYF3 556 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 PLA2G4BP0C869 781 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 SP100P23497 879 aaPredicted RBP13.16□□□□□ -0.3
ERBB3-219ENST00000551242 EPHB2P29323 1055 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 POLE2P56282 527 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 CTTNQ14247 550 aaKnown RBP13.16□□□□□ -0.3
ERBB3-219ENST00000551242 SLC5A9Q2M3M2 681 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 INTS8Q75QN2 995 aaKnown RBP13.16□□□□□ -0.3
ERBB3-219ENST00000551242 CCDC105Q8IYK2 499 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 CYP4X1Q8N118 509 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 SLC30A5Q8TAD4 765 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 HAS1Q92839 578 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 PAIP2Q9BPZ3 127 aaKnown RBP13.16□□□□□ -0.3
ERBB3-219ENST00000551242 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 USP40Q9NVE5 1235 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 NIP7Q9Y221 180 aaKnown RBP eCLIP13.16□□□□□ -0.3
ERBB3-219ENST00000551242 ASB3Q9Y575 518 aa13.16□□□□□ -0.3
ERBB3-219ENST00000551242 NPTXRO95502 500 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 CHRNA3P32297 505 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 FOXN2P32314 431 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 STAT1P42224 750 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 KLC1Q07866 573 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 RRP1BQ14684 758 aaKnown RBP13.15□□□□□ -0.3
ERBB3-219ENST00000551242 UBE2SQ16763 222 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 DNAJC9Q8WXX5 260 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 BCAS3Q9H6U6 928 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 TXLNGQ9NUQ3 528 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 ALG6Q9Y672 507 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 NHSL1Q5SYE7 1610 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 COL5A2P05997 1499 aaPredicted RBP13.15□□□□□ -0.3
ERBB3-219ENST00000551242 CLIC2O15247 247 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 PYGLP06737 847 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 TMEM253P0C7T8 217 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 HOXD13P35453 343 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 LAMB3Q13751 1172 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 EDRF1Q3B7T1 1238 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 RNF43Q68DV7 783 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 FRMD5Q7Z6J6 570 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 ASAP3Q8TDY4 903 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 SPOCK2Q92563 424 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 ANKRD27Q96NW4 1050 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 TBC1D10AQ9BXI6 508 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 PITPNM3Q9BZ71 974 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 LRMDAQ9H2I8 198 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 IKZF4Q9H2S9 585 aa13.15□□□□□ -0.3
ERBB3-219ENST00000551242 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
ERBB3-219ENST00000551242 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms