RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 AFMP43652 599 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 ZNF131P52739 623 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 NCBP1Q09161 790 aaKnown RBP23.68■■□□□ 1.38
NEK3-202ENST00000550841 NFX1Q12986 1120 aaKnown RBP23.68■■□□□ 1.38
NEK3-202ENST00000550841 SNW1Q13573 536 aaKnown RBP23.68■■□□□ 1.38
NEK3-202ENST00000550841 TMEM40Q8WWA1 233 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 STAMQ92783 540 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 DNAJC19Q96DA6 116 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 FTHL17Q9BXU8 183 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 TRIM9Q9C026 710 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 KMT5AQ9NQR1 393 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 SEL1LQ9UBV2 794 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 PADI3Q9ULW8 664 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 ST3GAL5Q9UNP4 418 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 LTBP2Q14767 1821 aa23.68■■□□□ 1.38
NEK3-202ENST00000550841 EFCAB14O75071 495 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 ACRP10323 421 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 IDEP14735 1019 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 CD52P31358 61 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 ABCD1P33897 745 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 NPTX2P47972 431 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 CACNB1Q02641 598 aaPredicted RBP23.67■■□□□ 1.38
NEK3-202ENST00000550841 IKBKEQ14164 716 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 DEFB123Q8N688 67 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 DBF4BQ8NFT6 615 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 BSNDQ8WZ55 320 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 MTIF3Q9H2K0 278 aaKnown RBP23.67■■□□□ 1.38
NEK3-202ENST00000550841 AGO3Q9H9G7 860 aaKnown RBP23.67■■□□□ 1.38
NEK3-202ENST00000550841 PANK4Q9NVE7 773 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 RANBP2P49792 3224 aaKnown RBP23.67■■□□□ 1.38
NEK3-202ENST00000550841 MYH11P35749 1972 aa23.67■■□□□ 1.38
NEK3-202ENST00000550841 ABHD14A-ACY1A0A1B0GW23 586 aa23.66■■□□□ 1.38
NEK3-202ENST00000550841 INO80B-WBP1J3KQ70 363 aa23.66■■□□□ 1.38
NEK3-202ENST00000550841 KINO60870 393 aaKnown RBP23.66■■□□□ 1.38
NEK3-202ENST00000550841 ASIC1P78348 528 aa23.66■■□□□ 1.38
NEK3-202ENST00000550841 TMEM240Q5SV17 173 aa23.66■■□□□ 1.38
NEK3-202ENST00000550841 CDCA2Q69YH5 1023 aaPredicted RBP23.66■■□□□ 1.38
NEK3-202ENST00000550841 ZNF365Q70YC5 407 aa23.66■■□□□ 1.38
NEK3-202ENST00000550841 CATSPER4Q7RTX7 472 aa23.66■■□□□ 1.38
NEK3-202ENST00000550841 FAM228AQ86W67 206 aa23.66■■□□□ 1.38
NEK3-202ENST00000550841 ELOA2Q8IYF1 753 aaPredicted RBP23.66■■□□□ 1.38
NEK3-202ENST00000550841 ERVK-5Q9HDB9 667 aa23.66■■□□□ 1.38
NEK3-202ENST00000550841 LMBRD1Q9NUN5 540 aa23.66■■□□□ 1.38
NEK3-202ENST00000550841 SCN5AQ14524 2016 aa23.66■■□□□ 1.38
NEK3-202ENST00000550841 PVALEFA0A1B0GWK0 134 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 K7ERI5 159 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 GTPBP6O43824 516 aaPredicted RBP23.65■■□□□ 1.38
NEK3-202ENST00000550841 TRAK2O60296 914 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 BAIAP3O94812 1187 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 MAPTP10636 758 aaKnown RBP23.65■■□□□ 1.38
NEK3-202ENST00000550841 LIG1P18858 919 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 MAPK6Q16659 721 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 HERC4Q5GLZ8 1057 aaPredicted RBP23.65■■□□□ 1.38
NEK3-202ENST00000550841 C16orf59Q7L2K0 433 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 OSBPL7Q9BZF2 842 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 TMEM134Q9H6X4 195 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 CHST12Q9NRB3 414 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 PRMT7Q9NVM4 692 aaPredicted RBP23.65■■□□□ 1.38
NEK3-202ENST00000550841 SZT2Q5T011 3432 aa23.65■■□□□ 1.38
NEK3-202ENST00000550841 FRMD3A2A2Y4 597 aa23.64■■□□□ 1.37
NEK3-202ENST00000550841 NR1I2O75469 434 aa23.64■■□□□ 1.37
NEK3-202ENST00000550841 ERLIN2O94905 339 aa23.64■■□□□ 1.37
NEK3-202ENST00000550841 ZSCAN20P17040 1043 aaPredicted RBP23.64■■□□□ 1.37
NEK3-202ENST00000550841 AXLP30530 894 aa23.64■■□□□ 1.37
NEK3-202ENST00000550841 UNC13DQ70J99 1090 aa23.64■■□□□ 1.37
NEK3-202ENST00000550841 FAM178BQ8IXR5 827 aa23.64■■□□□ 1.37
NEK3-202ENST00000550841 CCDC47Q96A33 483 aaKnown RBP23.64■■□□□ 1.37
NEK3-202ENST00000550841 VWCEQ96DN2 955 aa23.64■■□□□ 1.37
NEK3-202ENST00000550841 PRIMPOLQ96LW4 560 aa23.64■■□□□ 1.37
NEK3-202ENST00000550841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.63■■□□□ 1.37
NEK3-202ENST00000550841 SLC16A4O15374 487 aa23.63■■□□□ 1.37
NEK3-202ENST00000550841 CSDE1O75534 798 aaKnown RBP23.63■■□□□ 1.37
NEK3-202ENST00000550841 EPHB4P54760 987 aa23.63■■□□□ 1.37
NEK3-202ENST00000550841 MBTD1Q05BQ5 628 aa23.63■■□□□ 1.37
NEK3-202ENST00000550841 CUL4BQ13620 913 aa23.63■■□□□ 1.37
NEK3-202ENST00000550841 FAM187BQ17R55 369 aa23.63■■□□□ 1.37
NEK3-202ENST00000550841 HERVK_113Q902F9 699 aa23.63■■□□□ 1.37
NEK3-202ENST00000550841 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.63■■□□□ 1.37
NEK3-202ENST00000550841 BLZF1Q9H2G9 400 aa23.63■■□□□ 1.37
NEK3-202ENST00000550841 FZD8Q9H461 694 aa23.63■■□□□ 1.37
NEK3-202ENST00000550841 MINDY3Q9H8M7 445 aa23.63■■□□□ 1.37
NEK3-202ENST00000550841 RNF216Q9NWF9 866 aaPredicted RBP23.63■■□□□ 1.37
NEK3-202ENST00000550841 ARHGAP28Q9P2N2 729 aa23.63■■□□□ 1.37
NEK3-202ENST00000550841 TET1Q8NFU7 2136 aa23.62■■□□□ 1.37
NEK3-202ENST00000550841 NCKAP1LP55160 1127 aa23.62■■□□□ 1.37
NEK3-202ENST00000550841 PPP4R3CPQ6ZMV5 832 aa23.62■■□□□ 1.37
NEK3-202ENST00000550841 GRAMD1CQ8IYS0 662 aa23.62■■□□□ 1.37
NEK3-202ENST00000550841 KCNN1Q92952 543 aa23.62■■□□□ 1.37
NEK3-202ENST00000550841 OLFML3Q9NRN5 406 aa23.62■■□□□ 1.37
NEK3-202ENST00000550841 DACT1Q9NYF0 836 aa23.62■■□□□ 1.37
NEK3-202ENST00000550841 SIP14410 1827 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 DENND3A2RUS2 1198 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 ACKR2O00590 384 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 FGFR4P22455 802 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 STRN3Q13033 797 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 POSTNQ15063 836 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 STXBP4Q6ZWJ1 553 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 Q7L0L9 218 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 OTOP2Q7RTS6 562 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 HAUS6Q7Z4H7 955 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms