RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 ZNF598Q86UK7 904 aaKnown RBP12.49□□□□□ -0.41
BRF1-218ENST00000550692 POLR3FQ9H1D9 316 aaPredicted RBP12.49□□□□□ -0.41
BRF1-218ENST00000550692 DDX19AQ9NUU7 478 aaKnown RBP12.49□□□□□ -0.41
BRF1-218ENST00000550692 RNF216Q9NWF9 866 aaPredicted RBP12.49□□□□□ -0.41
BRF1-218ENST00000550692 DACT1Q9NYF0 836 aa12.49□□□□□ -0.41
BRF1-218ENST00000550692 LMCD1Q9NZU5 365 aa12.49□□□□□ -0.41
BRF1-218ENST00000550692 CFAP45Q9UL16 551 aa12.49□□□□□ -0.41
BRF1-218ENST00000550692 RWDD3Q9Y3V2 267 aa12.49□□□□□ -0.41
BRF1-218ENST00000550692 MUC3AQ02505 3323 aa12.49□□□□□ -0.41
BRF1-218ENST00000550692 KIAA1671Q9BY89 1806 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 MYO7AQ13402 2215 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 VWA3AA6NCI4 1184 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 E9PMD0 336 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 GRM6O15303 877 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 EOMESO95936 686 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 CYP11B2P19099 503 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 HOXA11P31270 313 aaPredicted RBP12.48□□□□□ -0.41
BRF1-218ENST00000550692 PHKA2P46019 1235 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 TFDP1Q14186 410 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 SKIV2LQ15477 1246 aaKnown RBP12.48□□□□□ -0.41
BRF1-218ENST00000550692 KRT79Q5XKE5 535 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 IFNLR1Q8IU57 520 aaPredicted RBP12.48□□□□□ -0.41
BRF1-218ENST00000550692 MCPH1Q8NEM0 835 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 CASD1Q96PB1 797 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 C11orf84Q9BUA3 381 aaPredicted RBP12.48□□□□□ -0.41
BRF1-218ENST00000550692 PLVAPQ9BX97 442 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 TMEM117Q9H0C3 514 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 BHMT2Q9H2M3 363 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 POLD4Q9HCU8 107 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 ALG13Q9NP73 1137 aaKnown RBP12.48□□□□□ -0.41
BRF1-218ENST00000550692 AGPAT5Q9NUQ2 364 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 FAM105AQ9NUU6 356 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 TYW1Q9NV66 732 aaKnown RBP12.48□□□□□ -0.41
BRF1-218ENST00000550692 STK24Q9Y6E0 443 aa12.48□□□□□ -0.41
BRF1-218ENST00000550692 MEIS3P2A8K0S8 358 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 INO80B-WBP1J3KQ70 363 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 HOXA2O43364 376 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 BMP15O95972 392 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 MBTD1Q05BQ5 628 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 POU5F1BQ06416 359 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 SF3A1Q15459 793 aaKnown RBP12.47□□□□□ -0.41
BRF1-218ENST00000550692 ZRSR1Q15695 479 aaKnown RBP12.47□□□□□ -0.41
BRF1-218ENST00000550692 PTPROQ16827 1216 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 LONRF3Q496Y0 759 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 CLLU1OSQ5K130 101 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 SPOUT1Q5T280 376 aaKnown RBP12.47□□□□□ -0.41
BRF1-218ENST00000550692 ARL6IP4Q66PJ3 421 aaKnown RBP12.47□□□□□ -0.41
BRF1-218ENST00000550692 FAM173BQ6P4H8 233 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 LRRC55Q6ZSA7 311 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 KCNK18Q7Z418 384 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 KLHL23Q8NBE8 558 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 HELQQ8TDG4 1101 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 LPPQ93052 612 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 MRPL38Q96DV4 380 aaKnown RBP12.47□□□□□ -0.41
BRF1-218ENST00000550692 PNMA5Q96PV4 448 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 TRAIPQ9BWF2 469 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 CWH43Q9H720 699 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 PLAGL2Q9UPG8 496 aa12.47□□□□□ -0.41
BRF1-218ENST00000550692 LRRIQ4A6NIV6 560 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 TSPAN1O60635 241 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 ZNF623O75123 536 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 ERLIN2O94905 339 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 CSPG5O95196 566 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 EYA4O95677 639 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 ITGB1P05556 798 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 GRIN1Q05586 938 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 CAMK1Q14012 370 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 AMHR2Q16671 573 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 UBXN11Q5T124 520 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 ABI1Q8IZP0 508 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 SPPL3Q8TCT6 385 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 BSNDQ8WZ55 320 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 P2RX5Q93086 422 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 CPB2Q96IY4 423 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 PLIN2Q99541 437 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 NFKBIZQ9BYH8 718 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 THEGQ9P2T0 379 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 TFIP11Q9UBB9 837 aaKnown RBP12.46□□□□□ -0.41
BRF1-218ENST00000550692 DNM3Q9UQ16 869 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 PCDHB2Q9Y5E7 798 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 CLIC4Q9Y696 253 aa12.46□□□□□ -0.41
BRF1-218ENST00000550692 B4GALT5O43286 388 aa12.45□□□□□ -0.42
BRF1-218ENST00000550692 SKIP12755 728 aa12.45□□□□□ -0.42
BRF1-218ENST00000550692 ARF4P18085 180 aaPredicted RBP12.45□□□□□ -0.42
BRF1-218ENST00000550692 DNAJB1P25685 340 aa12.45□□□□□ -0.42
BRF1-218ENST00000550692 RAB27AP51159 221 aa12.45□□□□□ -0.42
BRF1-218ENST00000550692 KRT85P78386 507 aa12.45□□□□□ -0.42
BRF1-218ENST00000550692 TFF2Q03403 129 aa12.45□□□□□ -0.42
BRF1-218ENST00000550692 DNM1Q05193 864 aaKnown RBP12.45□□□□□ -0.42
BRF1-218ENST00000550692 PCBP1Q15365 356 aaKnown RBP eCLIP12.45□□□□□ -0.42
BRF1-218ENST00000550692 FOXD4L6Q3SYB3 417 aaPredicted RBP12.45□□□□□ -0.42
BRF1-218ENST00000550692 HYIQ5T013 277 aa12.45□□□□□ -0.42
BRF1-218ENST00000550692 FOXD4L3Q6VB84 417 aaPredicted RBP12.45□□□□□ -0.42
BRF1-218ENST00000550692 SCAND2PQ9GZW5 306 aaPredicted RBP12.45□□□□□ -0.42
BRF1-218ENST00000550692 LMAN2LQ9H0V9 348 aa12.45□□□□□ -0.42
BRF1-218ENST00000550692 AAASQ9NRG9 546 aa12.45□□□□□ -0.42
BRF1-218ENST00000550692 PCDHB12Q9Y5F1 795 aa12.45□□□□□ -0.42
BRF1-218ENST00000550692 OFD1O75665 1012 aa12.44□□□□□ -0.42
BRF1-218ENST00000550692 AXLP30530 894 aa12.44□□□□□ -0.42
BRF1-218ENST00000550692 PBX3P40426 434 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms