RNA–Protein interactions for RNA: ENST00000550555.1

PAN2-216, Transcript of poly(A) specific ribonuclease subunit PAN2, human

TSL 4

Gene PAN2, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAN2-216	ENST00000550555	HIDE1	A8MVS5	230 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	LOC730098	B7Z3J9	87 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	GAS2	O43903	313 aa	Known RBP	13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	LYPLA2	O95372	231 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	SEC24B	O95487	1268 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	HOXA11	P31270	313 aa	Predicted RBP	13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	RAB27A	P51159	221 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	POLG	P54098	1239 aa	Predicted RBP	13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	CBX2	Q14781	532 aa	Predicted RBP	13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	TWF2	Q6IBS0	349 aa	Known RBP	13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	NCAPH2	Q6IBW4	605 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	TMEM173	Q86WV6	379 aa	Predicted RBP	13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	PSPC1	Q8WXF1	523 aa	Known RBP	13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	LPP	Q93052	612 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	TMEM143	Q96AN5	459 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	DYDC2	Q96IM9	177 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	HSD17B14	Q9BPX1	270 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	ZSWIM4	Q9H7M6	989 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	NGRN	Q9NPE2	291 aa	Known RBP	13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	XPNPEP1	Q9NQW7	623 aa		13.31	□□□□□ -0.28
PAN2-216	ENST00000550555	BTBD18	B2RXH4	712 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	ZBTB39	O15060	712 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	B4GALT3	O60512	393 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	SLITRK3	O94933	977 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	SKI	P12755	728 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	NEK4	P51957	841 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	BCAR1	P56945	870 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	CYP4A11	Q02928	519 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	LAMTOR4	Q0VGL1	99 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	CTTN	Q14247	550 aa	Known RBP	13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	UBXN11	Q5T124	520 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	SYCE2	Q6PIF2	218 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	CATSPER4	Q7RTX7	472 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	SRGAP1	Q7Z6B7	1085 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	FERMT3	Q86UX7	667 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	RNF135	Q8IUD6	432 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	DIS3L2	Q8IYB7	885 aa	Known RBP	13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	EXOC8	Q8IYI6	725 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	MICAL1	Q8TDZ2	1067 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	PRPF31	Q8WWY3	499 aa	Known RBP	13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	MTMR9	Q96QG7	549 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	S1PR5	Q9H228	398 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	BRMS1	Q9HCU9	246 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	ENTPD7	Q9NQZ7	604 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	TBC1D13	Q9NVG8	400 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	PUF60	Q9UHX1	559 aa	Known RBP	13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	MUTYH	Q9UIF7	546 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	HCN4	Q9Y3Q4	1203 aa		13.3	□□□□□ -0.28
PAN2-216	ENST00000550555	C2orf71	A6NGG8	1288 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	NEMF	O60524	1076 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	OFD1	O75665	1012 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	KRT17	Q04695	432 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	CALCRL	Q16602	461 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	NOMO2	Q5JPE7	1267 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	ANKRD54	Q6NXT1	300 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	AGMO	Q6ZNB7	445 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	MRPL10	Q7Z7H8	261 aa	Known RBP	13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	VN1R3	Q9BXE9	311 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	ZBP1	Q9H171	429 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	NRDE2	Q9H7Z3	1164 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	PCDHB2	Q9Y5E7	798 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	DENND4A	Q7Z401	1863 aa		13.29	□□□□□ -0.28
PAN2-216	ENST00000550555	INPPL1	O15357	1258 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	BAG4	O95429	457 aa	Known RBP	13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	SMC1A	Q14683	1233 aa	Known RBP	13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	XKR9	Q5GH70	373 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	GLB1L	Q6UWU2	654 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	OTUD6A	Q7L8S5	288 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	MRPL43	Q8N983	215 aa	Known RBP	13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	RNF149	Q8NC42	400 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	TCP11	Q8WWU5	503 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	IGSF21	Q96ID5	467 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	MTR	Q99707	1265 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	PHF7	Q9BWX1	381 aa	Predicted RBP	13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	TMEM60	Q9H2L4	133 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	IRAK3	Q9Y616	596 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	CACNA1H	O95180	2353 aa		13.28	□□□□□ -0.28
PAN2-216	ENST00000550555	CARNS1	A5YM72	827 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	NT5C1B-RDH14	C9J2C7	533 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	ASAP2	O43150	1006 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	MARCH6	O60337	910 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	TSPAN1	O60635	241 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	EIF5B	O60841	1220 aa	Known RBP	13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	CLASP2	O75122	1294 aa	Known RBP	13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	GALT	P07902	379 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	SRGAP2C	P0DJJ0	459 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	SRGAP2B	P0DMP2	458 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	TEC	P42680	631 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	ALDH7A1	P49419	539 aa	Known RBP	13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	RARRES1	P49788	294 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	AFF1	P51825	1210 aa	Known RBP	13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	FOSB	P53539	338 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	PTEN	P60484	403 aa		13.27	□□□□□ -0.29
PAN2-216	ENST00000550555	POU5F1B	Q06416	359 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms