RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 CSDE1O75534 798 aaKnown RBP11.32□□□□□ -0.6
RAB5C-207ENST00000550504 THPOP40225 353 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 PHKA2P46019 1235 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 STX17P56962 302 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 MRPS6P82932 125 aaKnown RBP11.32□□□□□ -0.6
RAB5C-207ENST00000550504 TRIM60Q495X7 471 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 NECAB2Q7Z6G3 386 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 ZNF410Q86VK4 478 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 ZBTB8OSQ8IWT0 167 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 FAM126BQ8IXS8 530 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 NME8Q8N427 588 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 GUF1Q8N442 669 aaKnown RBP11.32□□□□□ -0.6
RAB5C-207ENST00000550504 SLC17A8Q8NDX2 589 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 NELFBQ8WX92 580 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 OSMRQ99650 979 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 SEZ6LQ9BYH1 1024 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 INO80BQ9C086 356 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-207ENST00000550504 ADAMTS10Q9H324 1103 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 ST6GALNAC4Q9H4F1 302 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 ARHGAP28Q9P2N2 729 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 TBX20Q9UMR3 447 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 ATP11BQ9Y2G3 1177 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 USP20Q9Y2K6 914 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 CDY2AQ9Y6F7 541 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 KIAA0100Q14667 2235 aaKnown RBP11.32□□□□□ -0.6
RAB5C-207ENST00000550504 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 K7ERI5 159 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 PSMA7O14818 248 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 GPR32O75388 356 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 PPP1R37O75864 691 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 KIF20AO95235 890 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 CD4P01730 458 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 FGFR4P22455 802 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 HOXD13P35453 343 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 ZNF165P49910 485 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 PTENP60484 403 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 GTF2BQ00403 316 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 STRN3Q13033 797 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 PAK1Q13153 545 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 ALCAMQ13740 583 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 BMT2Q1RMZ1 405 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 LRRC26Q2I0M4 334 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 TRIM71Q2Q1W2 868 aaKnown RBP11.31□□□□□ -0.6
RAB5C-207ENST00000550504 COBLL1Q53SF7 1204 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 CDCA2Q69YH5 1023 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-207ENST00000550504 TAS1R3Q7RTX0 852 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 GAS2L3Q86XJ1 694 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 SYCP3Q8IZU3 236 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 ZNF507Q8TCN5 953 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 BICD1Q96G01 975 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 DHTKD1Q96HY7 919 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-207ENST00000550504 ACCSQ96QU6 501 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 STRA6Q9BX79 667 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 CELF4Q9BZC1 486 aaKnown RBP11.31□□□□□ -0.6
RAB5C-207ENST00000550504 GCOM2Q9BZD3 368 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-207ENST00000550504 NAT10Q9H0A0 1025 aaKnown RBP11.31□□□□□ -0.6
RAB5C-207ENST00000550504 C2orf40Q9H1Z8 148 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 MINDY3Q9H8M7 445 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 IFT122Q9HBG6 1241 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 TRPV2Q9Y5S1 764 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 MROH7Q68CQ1 1323 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 PHLPP2Q6ZVD8 1323 aa11.31□□□□□ -0.6
RAB5C-207ENST00000550504 ZMYM2Q9UBW7 1377 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 DCDC2CA8MYV0 355 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 PRKCBP05771 671 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 DARSP14868 501 aaKnown RBP11.3□□□□□ -0.6
RAB5C-207ENST00000550504 CAPN2P17655 700 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 CCNE1P24864 410 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 PPP1R2P41236 205 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 EFNA5P52803 228 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 PMS1P54277 932 aaKnown RBP11.3□□□□□ -0.6
RAB5C-207ENST00000550504 CDC42EP1Q00587 391 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 TLE2Q04725 743 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 MBTD1Q05BQ5 628 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 POU5F1BQ06416 359 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 SNX17Q15036 470 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 KNOP1Q1ED39 458 aaKnown RBP11.3□□□□□ -0.6
RAB5C-207ENST00000550504 ZNF618Q5T7W0 954 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 ANKRD33Q7Z3H0 272 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 RPAINQ86UA6 219 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 MAP4K3Q8IVH8 894 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 AOPEPQ8N6M6 819 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 RNF214Q8ND24 703 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 TMEM40Q8WWA1 233 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 P2RX5Q93086 422 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 HVCN1Q96D96 273 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 MED15Q96RN5 788 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 CCDC113Q9H0I3 377 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 SEMA6BQ9H3T3 888 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 TMEM134Q9H6X4 195 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 EXOC7Q9UPT5 735 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 UBE4BO95155 1302 aa11.3□□□□□ -0.6
RAB5C-207ENST00000550504 CEP290O15078 2479 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 TISP43B9A030 160 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 B4GALT5O43286 388 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 TGFB1I1O43294 461 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 CHRNA1P02708 482 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 EDN1P05305 212 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 RPLP2P05387 115 aaKnown RBP11.29□□□□□ -0.6
RAB5C-207ENST00000550504 IQCF3P0C7M6 154 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms