RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 DZANK1Q9NVP4 752 aa25.86■■□□□ 1.73
SMARCD1-209ENST00000550477 M0R2N6 131 aa25.85■■□□□ 1.73
SMARCD1-209ENST00000550477 ZNF623O75123 536 aa25.85■■□□□ 1.73
SMARCD1-209ENST00000550477 GCFC2P16383 781 aaKnown RBP25.85■■□□□ 1.73
SMARCD1-209ENST00000550477 STK3Q13188 491 aa25.85■■□□□ 1.73
SMARCD1-209ENST00000550477 NOMO2Q5JPE7 1267 aa25.85■■□□□ 1.73
SMARCD1-209ENST00000550477 URGCPQ8TCY9 931 aa25.85■■□□□ 1.73
SMARCD1-209ENST00000550477 CEP89Q96ST8 783 aa25.85■■□□□ 1.73
SMARCD1-209ENST00000550477 SH2D3AQ9BRG2 576 aa25.85■■□□□ 1.73
SMARCD1-209ENST00000550477 CYP26B1Q9NR63 512 aa25.85■■□□□ 1.73
SMARCD1-209ENST00000550477 PDRG1Q9NUG6 133 aa25.85■■□□□ 1.73
SMARCD1-209ENST00000550477 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 CLASP2O75122 1294 aaKnown RBP25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 STBD1O95210 358 aa25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 P4HBP07237 508 aaKnown RBP25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 ATAT1Q5SQI0 421 aa25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 OTUD6AQ7L8S5 288 aa25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 NEK8Q86SG6 692 aa25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 DDX53Q86TM3 631 aaKnown RBP25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 PPFIBP1Q86W92 1011 aa25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 CEP170P1Q96L14 293 aa25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 FAM193BQ96PV7 902 aaPredicted RBP25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 KANSL3Q9P2N6 904 aa25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 INPP5FQ9Y2H2 1132 aa25.84■■□□□ 1.73
SMARCD1-209ENST00000550477 TMEM150BA6NC51 233 aa25.83■■□□□ 1.73
SMARCD1-209ENST00000550477 PPP2R5CQ13362 524 aa25.83■■□□□ 1.73
SMARCD1-209ENST00000550477 PPP4R3AQ6IN85 833 aa25.83■■□□□ 1.73
SMARCD1-209ENST00000550477 ANO5Q75V66 913 aa25.83■■□□□ 1.73
SMARCD1-209ENST00000550477 SRGAP1Q7Z6B7 1085 aa25.83■■□□□ 1.73
SMARCD1-209ENST00000550477 UBALD2Q8IYN6 164 aa25.83■■□□□ 1.73
SMARCD1-209ENST00000550477 IGSF21Q96ID5 467 aa25.83■■□□□ 1.73
SMARCD1-209ENST00000550477 COL4A3BPQ9Y5P4 624 aa25.83■■□□□ 1.73
SMARCD1-209ENST00000550477 IRAK3Q9Y616 596 aa25.83■■□□□ 1.73
SMARCD1-209ENST00000550477 SPDYE4A6NLX3 237 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 TBX3O15119 743 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 ASAP2O43150 1006 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 GAS2O43903 313 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 BAG4O95429 457 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 CTSAP10619 480 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 SP100P23497 879 aaPredicted RBP25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 RFC5P40937 340 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 MTMR3Q13615 1198 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 LONRF3Q496Y0 759 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 PLCD3Q8N3E9 789 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 TCP11Q8WWU5 503 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 PSPC1Q8WXF1 523 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 LPPQ93052 612 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 ZBP1Q9H171 429 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 TBC1D13Q9NVG8 400 aa25.82■■□□□ 1.72
SMARCD1-209ENST00000550477 OFD1O75665 1012 aa25.81■■□□□ 1.72
SMARCD1-209ENST00000550477 GALTP07902 379 aa25.81■■□□□ 1.72
SMARCD1-209ENST00000550477 KSR1Q8IVT5 923 aa25.81■■□□□ 1.72
SMARCD1-209ENST00000550477 LARP6Q9BRS8 491 aaKnown RBP25.81■■□□□ 1.72
SMARCD1-209ENST00000550477 EMILIN2Q9BXX0 1053 aa25.81■■□□□ 1.72
SMARCD1-209ENST00000550477 GBP3Q9H0R5 595 aa25.81■■□□□ 1.72
SMARCD1-209ENST00000550477 NRDE2Q9H7Z3 1164 aa25.81■■□□□ 1.72
SMARCD1-209ENST00000550477 DBR1Q9UK59 544 aaKnown RBP25.81■■□□□ 1.72
SMARCD1-209ENST00000550477 SORCS3Q9UPU3 1222 aa25.81■■□□□ 1.72
SMARCD1-209ENST00000550477 PCDHB2Q9Y5E7 798 aa25.81■■□□□ 1.72
SMARCD1-209ENST00000550477 CCNT1O60563 726 aaKnown RBP25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 ALDH2P05091 517 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 NUBP1P53384 320 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 NCBP1Q09161 790 aaKnown RBP25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 PLA2G4FQ68DD2 849 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 KREMEN2Q8NCW0 462 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 CNNM3Q8NE01 707 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 WASF1Q92558 559 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 ASIC4Q96FT7 647 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 AIFM3Q96NN9 605 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 PHF20Q9BVI0 1012 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 UBN1Q9NPG3 1134 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 AGPAT5Q9NUQ2 364 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 KCNJ14Q9UNX9 436 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 CNTNAP2Q9UHC6 1331 aa25.8■■□□□ 1.72
SMARCD1-209ENST00000550477 EML1O00423 815 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 SLC37A4O43826 429 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 SRGAP2CP0DJJ0 459 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 AVPR2P30518 371 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 EPHA7Q15375 998 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 RARS2Q5T160 578 aaKnown RBP25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 IER5LQ5T953 404 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 CABP7Q86V35 215 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 C4orf19Q8IY42 314 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 SLFN12Q8IYM2 578 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 PRSS33Q8NF86 280 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 POMKQ9H5K3 350 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 RSAD1Q9HA92 442 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 IFT122Q9HBG6 1241 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 KCNMB3Q9NPA1 279 aa25.79■■□□□ 1.72
SMARCD1-209ENST00000550477 ZDBF2Q9HCK1 2354 aa25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 MYO10Q9HD67 2058 aa25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 NPEPPSP55786 919 aa25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 PCBP1Q15365 356 aaKnown RBP eCLIP25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 NPY5RQ15761 445 aa25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 TDRD5Q8NAT2 981 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 PRPF31Q8WWY3 499 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 DHX33Q9H6R0 707 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 BRMS1Q9HCU9 246 aa25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 USTQ9Y2C2 406 aa25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 SSX2IPQ9Y2D8 614 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms