RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 LIN7AO14910 233 aaPredicted RBP13.02□□□□□ -0.33
VDR-208ENST00000550325 NVLO15381 856 aaKnown RBP13.02□□□□□ -0.33
VDR-208ENST00000550325 KCNA3P22001 575 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 CASP4P49662 377 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 GALNTL6Q49A17 601 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 CROCCP2Q86T23 111 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 SCFD1Q8WVM8 642 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 CYP39A1Q9NYL5 469 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 TAS2R14Q9NYV8 317 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 PCDHA12Q9UN75 941 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 SIPA1L3O60292 1781 aaPredicted RBP13.01□□□□□ -0.33
VDR-208ENST00000550325 SFI1A8K8P3 1242 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 M0R2N6 131 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 PLA2G4BP0C869 781 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 ZCCHC18P0CG32 403 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 ATP6V1C1P21283 382 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 SP100P23497 879 aaPredicted RBP13.01□□□□□ -0.33
VDR-208ENST00000550325 DHX34Q14147 1143 aaKnown RBP13.01□□□□□ -0.33
VDR-208ENST00000550325 RFFLQ8WZ73 363 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 EPAS1Q99814 870 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 PARP2Q9UGN5 583 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 FER1L4A9Z1Z3 1794 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 ATMINO43313 823 aaPredicted RBP13.01□□□□□ -0.33
VDR-208ENST00000550325 ATP5DP30049 168 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 CASP5P51878 434 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 MGAT5Q09328 741 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 PABPC4Q13310 644 aaKnown RBP eCLIP13.01□□□□□ -0.33
VDR-208ENST00000550325 PIGBQ92521 554 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 UTP4Q969X6 686 aaKnown RBP13.01□□□□□ -0.33
VDR-208ENST00000550325 RGL1Q9NZL6 768 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 DCTN4Q9UJW0 460 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 TCRBV7S2A1N4TA0A589 114 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 PHF2O75151 1096 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 PEX11AO75192 247 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 DLATP10515 647 aaKnown RBP13.01□□□□□ -0.33
VDR-208ENST00000550325 STAT3P40763 770 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 DIXDC1Q155Q3 683 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 ARHGEF18Q6ZSZ5 1173 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 MAPKAPK5Q8IW41 473 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 TBC1D10AQ9BXI6 508 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 SLCO1B3Q9NPD5 702 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 GRHL1Q9NZI5 618 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 MTUS1Q9ULD2 1270 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 SUGT1Q9Y2Z0 365 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 ALG6Q9Y672 507 aa13.01□□□□□ -0.33
VDR-208ENST00000550325 RGPD5Q99666 1765 aa13□□□□□ -0.33
VDR-208ENST00000550325 PASKQ96RG2 1323 aa13□□□□□ -0.33
VDR-208ENST00000550325 GCNT3O95395 438 aa13□□□□□ -0.33
VDR-208ENST00000550325 TPBGLP0DKB5 382 aa13□□□□□ -0.33
VDR-208ENST00000550325 MPP2Q14168 576 aa13□□□□□ -0.33
VDR-208ENST00000550325 TTC27Q6P3X3 843 aa13□□□□□ -0.33
VDR-208ENST00000550325 ARHGAP22Q7Z5H3 698 aa13□□□□□ -0.33
VDR-208ENST00000550325 LNX1Q8TBB1 728 aaPredicted RBP13□□□□□ -0.33
VDR-208ENST00000550325 TGFBRAP1Q8WUH2 860 aa13□□□□□ -0.33
VDR-208ENST00000550325 BTBD6Q96KE9 485 aa13□□□□□ -0.33
VDR-208ENST00000550325 RUNDC3BQ96NL0 473 aa13□□□□□ -0.33
VDR-208ENST00000550325 DDX25Q9UHL0 483 aaKnown RBP13□□□□□ -0.33
VDR-208ENST00000550325 RASA4BC9J798 803 aa13□□□□□ -0.33
VDR-208ENST00000550325 POC1B-GALNT4F8VUJ3 575 aa13□□□□□ -0.33
VDR-208ENST00000550325 RASA4O43374 803 aa13□□□□□ -0.33
VDR-208ENST00000550325 PCP11498 1178 aaKnown RBP13□□□□□ -0.33
VDR-208ENST00000550325 PLS1Q14651 629 aa13□□□□□ -0.33
VDR-208ENST00000550325 PRUNE1Q86TP1 453 aa13□□□□□ -0.33
VDR-208ENST00000550325 SCYL3Q8IZE3 742 aa13□□□□□ -0.33
VDR-208ENST00000550325 C9orf72Q96LT7 481 aa13□□□□□ -0.33
VDR-208ENST00000550325 FAM118BQ9BPY3 351 aa13□□□□□ -0.33
VDR-208ENST00000550325 TXLNGYQ9BZA5 131 aa13□□□□□ -0.33
VDR-208ENST00000550325 IKZF4Q9H2S9 585 aa13□□□□□ -0.33
VDR-208ENST00000550325 BTG4Q9NY30 223 aa13□□□□□ -0.33
VDR-208ENST00000550325 STXBP5LQ9Y2K9 1186 aa13□□□□□ -0.33
VDR-208ENST00000550325 DDX3YO15523 660 aaKnown RBP13□□□□□ -0.33
VDR-208ENST00000550325 ATP9AO75110 1047 aa13□□□□□ -0.33
VDR-208ENST00000550325 IL2RBP14784 551 aa13□□□□□ -0.33
VDR-208ENST00000550325 GM2AP17900 193 aa13□□□□□ -0.33
VDR-208ENST00000550325 ADCY7P51828 1080 aa13□□□□□ -0.33
VDR-208ENST00000550325 IL9RQ01113 521 aa13□□□□□ -0.33
VDR-208ENST00000550325 POU5F1Q01860 360 aaKnown RBP13□□□□□ -0.33
VDR-208ENST00000550325 DRAP1Q14919 205 aaPredicted RBP13□□□□□ -0.33
VDR-208ENST00000550325 RCN1Q15293 331 aa13□□□□□ -0.33
VDR-208ENST00000550325 PPP2R5EQ16537 467 aa13□□□□□ -0.33
VDR-208ENST00000550325 VSTM1Q6UX27 236 aa13□□□□□ -0.33
VDR-208ENST00000550325 BRINP3Q76B58 766 aa13□□□□□ -0.33
VDR-208ENST00000550325 PRELID2Q8N945 189 aa13□□□□□ -0.33
VDR-208ENST00000550325 ZNF384Q8TF68 577 aa13□□□□□ -0.33
VDR-208ENST00000550325 CKAP2Q8WWK9 683 aa13□□□□□ -0.33
VDR-208ENST00000550325 STMN2Q93045 179 aa13□□□□□ -0.33
VDR-208ENST00000550325 DNAJC19Q96DA6 116 aa13□□□□□ -0.33
VDR-208ENST00000550325 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 TJP1Q07157 1748 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 ANKRD33BA6NCL7 494 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 O00370 1275 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 MAPK13O15264 365 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 RARGP13631 454 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 KLRK1P26718 216 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 CNGA1P29973 690 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 CHRNA3P32297 505 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 STRN3Q13033 797 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 SEPT7Q16181 437 aaKnown RBP12.99□□□□□ -0.33
VDR-208ENST00000550325 ZCWPW2Q504Y3 356 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms