RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 DEPTORQ8TB45 409 aa24.91■■□□□ 1.58
BRF1-216ENST00000550208 KIFC3Q9BVG8 833 aa24.91■■□□□ 1.58
BRF1-216ENST00000550208 CHST12Q9NRB3 414 aa24.91■■□□□ 1.58
BRF1-216ENST00000550208 CHMP5Q9NZZ3 219 aa24.91■■□□□ 1.58
BRF1-216ENST00000550208 MSRAQ9UJ68 235 aa24.91■■□□□ 1.58
BRF1-216ENST00000550208 PCDHA11Q9Y5I1 949 aa24.91■■□□□ 1.58
BRF1-216ENST00000550208 TLL1O43897 1013 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 RAB30Q15771 203 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 E2F4Q16254 413 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 TPRNQ4KMQ1 711 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 CDCA2Q69YH5 1023 aaPredicted RBP24.9■■□□□ 1.58
BRF1-216ENST00000550208 SLC24A5Q71RS6 500 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 ZBTB8OSQ8IWT0 167 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 CRIPAKQ8N1N5 446 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 DHX58Q96C10 678 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 REEP2Q9BRK0 252 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 NKX2-4Q9H2Z4 354 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 C1orf112Q9NSG2 853 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 PIN4Q9Y237 131 aaKnown RBP24.9■■□□□ 1.58
BRF1-216ENST00000550208 TTC3P53804 2025 aa24.9■■□□□ 1.58
BRF1-216ENST00000550208 MYMKA6NI61 221 aa24.89■■□□□ 1.58
BRF1-216ENST00000550208 CCDC169A6NNP5 214 aa24.89■■□□□ 1.58
BRF1-216ENST00000550208 KRT18P05783 430 aaKnown RBP24.89■■□□□ 1.58
BRF1-216ENST00000550208 CMA1P23946 247 aa24.89■■□□□ 1.58
BRF1-216ENST00000550208 DNAJB2P25686 324 aa24.89■■□□□ 1.58
BRF1-216ENST00000550208 HOXA11P31270 313 aaPredicted RBP24.89■■□□□ 1.58
BRF1-216ENST00000550208 NPTX2P47972 431 aa24.89■■□□□ 1.58
BRF1-216ENST00000550208 SARSP49591 514 aaKnown RBP24.89■■□□□ 1.58
BRF1-216ENST00000550208 AMHR2Q16671 573 aa24.89■■□□□ 1.58
BRF1-216ENST00000550208 RAD9AQ99638 391 aa24.89■■□□□ 1.58
BRF1-216ENST00000550208 C2orf40Q9H1Z8 148 aa24.89■■□□□ 1.58
BRF1-216ENST00000550208 AGPAT5Q9NUQ2 364 aa24.89■■□□□ 1.58
BRF1-216ENST00000550208 ADGRA3Q8IWK6 1321 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 A0A1B0GVL5 298 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 POLR2DO15514 142 aaKnown RBP24.88■■□□□ 1.57
BRF1-216ENST00000550208 TSPAN1O60635 241 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 PLS3P13797 630 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 DYMQ7RTS9 669 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 IQUBQ8NA54 791 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 STAMQ92783 540 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 TIFAQ96CG3 184 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 FZD8Q9H461 694 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 C17orf75Q9HAS0 396 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 KCNH3Q9ULD8 1083 aa24.88■■□□□ 1.57
BRF1-216ENST00000550208 GBF1Q92538 1859 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 B4GALT5O43286 388 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 ERLIN2O94905 339 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 LIG1P18858 919 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 HTRA4P83105 476 aaPredicted RBP24.87■■□□□ 1.57
BRF1-216ENST00000550208 PCBP1Q15365 356 aaKnown RBP eCLIP24.87■■□□□ 1.57
BRF1-216ENST00000550208 NPAS4Q8IUM7 802 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 CPB2Q96IY4 423 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 IPO9Q96P70 1041 aaKnown RBP24.87■■□□□ 1.57
BRF1-216ENST00000550208 NTPCRQ9BSD7 190 aaKnown RBP24.87■■□□□ 1.57
BRF1-216ENST00000550208 KMT5AQ9NQR1 393 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 DACT1Q9NYF0 836 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 LRFN2Q9ULH4 789 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 ODF2LQ9ULJ1 636 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 USP20Q9Y2K6 914 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 PCDHB7Q9Y5E2 793 aa24.87■■□□□ 1.57
BRF1-216ENST00000550208 LCHNA4D1U4 455 aa24.86■■□□□ 1.57
BRF1-216ENST00000550208 SLC16A4O15374 487 aa24.86■■□□□ 1.57
BRF1-216ENST00000550208 STAG3L1P0CL83 205 aa24.86■■□□□ 1.57
BRF1-216ENST00000550208 DMP1Q13316 513 aaPredicted RBP24.86■■□□□ 1.57
BRF1-216ENST00000550208 TWF2Q6IBS0 349 aaKnown RBP24.86■■□□□ 1.57
BRF1-216ENST00000550208 ECHDC2Q86YB7 292 aa24.86■■□□□ 1.57
BRF1-216ENST00000550208 SPIRE2Q8WWL2 714 aa24.86■■□□□ 1.57
BRF1-216ENST00000550208 DDX12PQ92771 950 aa24.86■■□□□ 1.57
BRF1-216ENST00000550208 CCDC113Q9H0I3 377 aa24.86■■□□□ 1.57
BRF1-216ENST00000550208 ZHX3Q9H4I2 956 aa24.86■■□□□ 1.57
BRF1-216ENST00000550208 PRMT7Q9NVM4 692 aaPredicted RBP24.86■■□□□ 1.57
BRF1-216ENST00000550208 INSL6Q9Y581 213 aa24.86■■□□□ 1.57
BRF1-216ENST00000550208 A0A0U1RQF3 1178 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 TTLL13PA6NNM8 815 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 FAM13AO94988 1023 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 ARHGEF15O94989 841 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 CA3P07451 260 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 PFKFB1P16118 471 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 ARF4P18085 180 aaPredicted RBP24.85■■□□□ 1.57
BRF1-216ENST00000550208 AXLP30530 894 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 EFNA5P52803 228 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 NCBP1Q09161 790 aaKnown RBP24.85■■□□□ 1.57
BRF1-216ENST00000550208 FAM187BQ17R55 369 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 UBXN11Q5T124 520 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 PPP4R3CPQ6ZMV5 832 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 MYCT1Q8N699 235 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 DNAJC19Q96DA6 116 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 CUEDC2Q9H467 287 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 HPSEQ9Y251 543 aa24.85■■□□□ 1.57
BRF1-216ENST00000550208 A0A1W2PQ27 194 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 A0A1W2PQ64 194 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 A0A1W2PQD8 194 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 K7ERI5 159 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 DGKIO75912 1065 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 EDN1P05305 212 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 PRKCBP05771 671 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 ZNF131P52739 623 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 MAPK6Q16659 721 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 GPR153Q6NV75 609 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 CDR2LQ86X02 465 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms