RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 TCP11Q8WWU5 503 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 HLA-CQ95604 372 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 NACC1Q96RE7 527 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 C11orf84Q9BUA3 381 aaPredicted RBP13.13□□□□□ -0.31
LETMD1-221ENST00000550100 PLVAPQ9BX97 442 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 EIF2AQ9BY44 585 aaKnown RBP13.13□□□□□ -0.31
LETMD1-221ENST00000550100 TMEM117Q9H0C3 514 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 RNF39Q9H2S5 420 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 FAM105AQ9NUU6 356 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 LRWD1Q9UFC0 647 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 KIAA1024Q9UPX6 916 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 H3BQV1 296 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 LINC01565O15544 149 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 ASAP2O43150 1006 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 GAS2O43903 313 aaKnown RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 TSPAN1O60635 241 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 EOMESO95936 686 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 EDN1P05305 212 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 LTBRP36941 435 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 CCT6AP40227 531 aaKnown RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 ERVFC1P60507 584 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 ATP2C1P98194 919 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 GRIN1Q05586 938 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 DLX2Q07687 328 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 HYAL1Q12794 435 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 COL19A1Q14993 1142 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 TWF2Q6IBS0 349 aaKnown RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 AGMOQ6ZNB7 445 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 FAM43BQ6ZT52 329 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 CDR2LQ86X02 465 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 EXOC8Q8IYI6 725 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 LRRC15Q8TF66 581 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 POF1BQ8WVV4 589 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 P2RX5Q93086 422 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 INO80BQ9C086 356 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 RWDD3Q9Y3V2 267 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-221ENST00000550100 PCDHB2Q9Y5E7 798 aa13.12□□□□□ -0.31
LETMD1-221ENST00000550100 E9PMD0 336 aa13.11□□□□□ -0.31
LETMD1-221ENST00000550100 ZNF623O75123 536 aa13.11□□□□□ -0.31
LETMD1-221ENST00000550100 OFD1O75665 1012 aa13.11□□□□□ -0.31
LETMD1-221ENST00000550100 FGF18O76093 207 aa13.11□□□□□ -0.31
LETMD1-221ENST00000550100 CYP11B2P19099 503 aa13.11□□□□□ -0.31
LETMD1-221ENST00000550100 MXD4Q14582 209 aaPredicted RBP13.11□□□□□ -0.31
LETMD1-221ENST00000550100 PTPROQ16827 1216 aa13.11□□□□□ -0.31
LETMD1-221ENST00000550100 FAM173BQ6P4H8 233 aa13.11□□□□□ -0.31
LETMD1-221ENST00000550100 MRPL10Q7Z7H8 261 aaKnown RBP13.11□□□□□ -0.31
LETMD1-221ENST00000550100 PNMA5Q96PV4 448 aa13.11□□□□□ -0.31
LETMD1-221ENST00000550100 NSUN3Q9H649 340 aaKnown RBP13.11□□□□□ -0.31
LETMD1-221ENST00000550100 UBE2ZQ9H832 354 aaPredicted RBP13.11□□□□□ -0.31
LETMD1-221ENST00000550100 DDX19AQ9NUU7 478 aaKnown RBP13.11□□□□□ -0.31
LETMD1-221ENST00000550100 DACT1Q9NYF0 836 aa13.11□□□□□ -0.31
LETMD1-221ENST00000550100 HES2Q9Y543 173 aa13.11□□□□□ -0.31
LETMD1-221ENST00000550100 NT5C1B-RDH14C9J2C7 533 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 PRPHP41219 470 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 RBM10P98175 930 aaKnown RBP13.1□□□□□ -0.31
LETMD1-221ENST00000550100 POU5F1BQ06416 359 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 RILPL1Q5EBL4 403 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 SPOUT1Q5T280 376 aaKnown RBP13.1□□□□□ -0.31
LETMD1-221ENST00000550100 TMEM173Q86WV6 379 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-221ENST00000550100 ZNF280BQ86YH2 543 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 DAW1Q8N136 415 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-221ENST00000550100 SNX29Q8TEQ0 813 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 BCL7CQ8WUZ0 217 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-221ENST00000550100 PLIN2Q99541 437 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 KIFC3Q9BVG8 833 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 BHMT2Q9H2M3 363 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 MIOSQ9NXC5 875 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 KIF3AQ9Y496 699 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 H3BQ06 376 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-221ENST00000550100 INO80B-WBP1J3KQ70 363 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 ARF4P18085 180 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-221ENST00000550100 SYT1P21579 422 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 KCNA5P22460 613 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 NAALADL2Q58DX5 795 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 KCNT2Q6UVM3 1135 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 DTHD1Q6ZMT9 781 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 ERMNQ8TAM6 284 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 ADAMTS19Q8TE59 1207 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 RUSC1Q9BVN2 902 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 CXCL16Q9H2A7 254 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 IGFLR1Q9H665 355 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 NRDE2Q9H7Z3 1164 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 TBC1D13Q9NVG8 400 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 DNAJB4Q9UDY4 337 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 COG5Q9UP83 839 aa13.1□□□□□ -0.31
LETMD1-221ENST00000550100 ARHGEF35A5YM69 484 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 VWA3AA6NCI4 1184 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 LRRIQ4A6NIV6 560 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 LAD1O00515 517 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms