RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 TMEM266Q2M3C6 531 aa17.57■□□□□ 0.4
CHMP1A-206ENST00000549139 FAM102BQ5T8I3 360 aa17.57■□□□□ 0.4
CHMP1A-206ENST00000549139 PDE12Q6L8Q7 609 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-206ENST00000549139 C4orf19Q8IY42 314 aa17.57■□□□□ 0.4
CHMP1A-206ENST00000549139 ERVK-5Q9HDB9 667 aa17.57■□□□□ 0.4
CHMP1A-206ENST00000549139 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-206ENST00000549139 PRR23AA6NEV1 266 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 M0QZ92 97 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 LAD1O00515 517 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 SLITRK3O94933 977 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 C22orf31O95567 290 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 SYT1P21579 422 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 NBL1P41271 181 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 TECP42680 631 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 NBR1Q14596 966 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 FAM43BQ6ZT52 329 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 BRAPQ7Z569 592 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 COLGALT1Q8NBJ5 622 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 DYDC2Q96IM9 177 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 HSD17B14Q9BPX1 270 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 EIF2AK1Q9BQI3 630 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 CWH43Q9H720 699 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 ZSWIM4Q9H7M6 989 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 AAASQ9NRG9 546 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 FOXD4L1Q9NU39 408 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 TYW1Q9NV66 732 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 RGL1Q9NZL6 768 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 LZTS1Q9Y250 596 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 PCDHB7Q9Y5E2 793 aa17.56■□□□□ 0.4
CHMP1A-206ENST00000549139 TBKBP1A7MCY6 615 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 DDX11L8A8MPP1 907 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 C9IYK1 514 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 PTGDRQ13258 359 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 ANO5Q75V66 913 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 KIAA0319LQ8IZA0 1049 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 TMEM105Q8N8V8 129 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 KREMEN2Q8NCW0 462 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 TMEM40Q8WWA1 233 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 CEP89Q96ST8 783 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 LXNQ9BS40 222 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 RGS18Q9NS28 235 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 SEPT9Q9UHD8 586 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 CEP250Q9BV73 2442 aa17.55■□□□□ 0.4
CHMP1A-206ENST00000549139 NCOR2Q9Y618 2525 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 VPS37CA5D8V6 355 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 LYPLA2O95372 231 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 TMOD1P28289 359 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 PRPHP41219 470 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 FXR2P51116 673 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 PLCB3Q01970 1234 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 NFX1Q12986 1120 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 CTTNQ14247 550 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 PDIA5Q14554 519 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 MTERF2Q49AM1 385 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 SPOUT1Q5T280 376 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 EFCAB12Q6NXP0 572 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 OTUD6AQ7L8S5 288 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 TPH2Q8IWU9 490 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 THNSL1Q8IYQ7 743 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 LINC01465Q8N7H1 131 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 APOL5Q9BWW9 433 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 CDHR5Q9HBB8 845 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 C1orf112Q9NSG2 853 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 WRAP73Q9P2S5 460 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 CDH22Q9UJ99 828 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 NOC2LQ9Y3T9 749 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 PPME1Q9Y570 386 aa17.54■□□□□ 0.4
CHMP1A-206ENST00000549139 MYH15Q9Y2K3 1946 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 POTEMA6NI47 508 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 HIDE1A8MVS5 230 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 BRD1O95696 1058 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 SRGAP2BP0DMP2 458 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 PDIA4P13667 645 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 HOXB8P17481 243 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 SP100P23497 879 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 FAM189BP81408 668 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 CYP4A11Q02928 519 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 TBC1D8BQ0IIM8 1120 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 PLPP4Q5VZY2 271 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 SLC24A5Q71RS6 500 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 UBALD2Q8IYN6 164 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 ZNF710Q8N1W2 664 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 METTL13Q8N6R0 699 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 MRPS27Q92552 414 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 ADAM2Q99965 735 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 SORCS3Q9UPU3 1222 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 DNAH14Q0VDD8 3507 aa17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 TPRP12270 2363 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-206ENST00000549139 EPG5Q9HCE0 2579 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 IGKV6-21A0A0C4DH24 114 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 TMEM150BA6NC51 233 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 STX6O43752 255 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 MAFO75444 373 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 RPS6KA5O75582 802 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 HSP90AA1P07900 732 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 XRCC6P12956 609 aaKnown RBP eCLIP17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 IBSPP21815 317 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 YWHABP31946 246 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 ATP2C1P98194 919 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 MTMR3Q13615 1198 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms