RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 IFT57Q9NWB7 429 aa5.97□□□□□ -1.45
CCDC38-206ENST00000548771 PARPBPQ9NWS1 579 aa5.97□□□□□ -1.45
CCDC38-206ENST00000548771 MYPNQ86TC9 1320 aa5.97□□□□□ -1.45
CCDC38-206ENST00000548771 GRXCR1A8MXD5 290 aa5.96□□□□□ -1.46
CCDC38-206ENST00000548771 GAAP10253 952 aa5.96□□□□□ -1.46
CCDC38-206ENST00000548771 INHBEP58166 350 aa5.96□□□□□ -1.46
CCDC38-206ENST00000548771 PHC1P78364 1004 aa5.96□□□□□ -1.46
CCDC38-206ENST00000548771 ELAVL1Q15717 326 aaKnown RBP5.96□□□□□ -1.46
CCDC38-206ENST00000548771 FKBP15Q5T1M5 1219 aa5.96□□□□□ -1.46
CCDC38-206ENST00000548771 NAIF1Q69YI7 327 aaPredicted RBP5.96□□□□□ -1.46
CCDC38-206ENST00000548771 PCSK4Q6UW60 755 aa5.96□□□□□ -1.46
CCDC38-206ENST00000548771 LDLRAD3Q86YD5 345 aa5.96□□□□□ -1.46
CCDC38-206ENST00000548771 SMC1BQ8NDV3 1235 aa5.96□□□□□ -1.46
CCDC38-206ENST00000548771 GPRC5BQ9NZH0 403 aa5.96□□□□□ -1.46
CCDC38-206ENST00000548771 USP36Q9P275 1121 aaKnown RBP5.96□□□□□ -1.46
CCDC38-206ENST00000548771 SYNPO2Q9UMS6 1093 aa5.96□□□□□ -1.46
CCDC38-206ENST00000548771 KPNA6O60684 536 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 PFKMP08237 780 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 KRT4P19013 534 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 CD40P25942 277 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 MAN2A2P49641 1150 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 SPIDRQ14159 915 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 SEPT7Q16181 437 aaKnown RBP5.95□□□□□ -1.46
CCDC38-206ENST00000548771 MAN2A1Q16706 1144 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 ZBTB41Q5SVQ8 909 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 ZNF627Q7L945 461 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 ULK2Q8IYT8 1036 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 PIK3C3Q8NEB9 887 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 MDGA1Q8NFP4 955 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 ZNF483Q8TF39 744 aaPredicted RBP5.95□□□□□ -1.46
CCDC38-206ENST00000548771 APPBP2Q92624 585 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 ZNF512Q96ME7 567 aaPredicted RBP5.95□□□□□ -1.46
CCDC38-206ENST00000548771 CEP89Q96ST8 783 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 NOL10Q9BSC4 688 aaKnown RBP5.95□□□□□ -1.46
CCDC38-206ENST00000548771 FANCLQ9NW38 375 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.95□□□□□ -1.46
CCDC38-206ENST00000548771 TRPS1Q9UHF7 1281 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 TMPRSS11EQ9UL52 423 aa5.95□□□□□ -1.46
CCDC38-206ENST00000548771 GOLGA8BA8MQT2 603 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 MAFGO15525 162 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 GAS7O60861 476 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 STC2O76061 302 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 SEC24DO94855 1032 aaPredicted RBP5.94□□□□□ -1.46
CCDC38-206ENST00000548771 FSBPO95073 299 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 MAKP20794 623 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 CD69Q07108 199 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 DALRD3Q5D0E6 543 aaKnown RBP5.94□□□□□ -1.46
CCDC38-206ENST00000548771 MFSD5Q6N075 450 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 UNC5BQ8IZJ1 945 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 HIST1H2AHQ96KK5 128 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 MNTQ99583 582 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 HIST1H2AJQ99878 128 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 SLC2A4RGQ9NR83 387 aa5.94□□□□□ -1.46
CCDC38-206ENST00000548771 THG1LQ9NWX6 298 aaKnown RBP5.94□□□□□ -1.46
CCDC38-206ENST00000548771 POLR2AP24928 1970 aaKnown RBP5.94□□□□□ -1.46
CCDC38-206ENST00000548771 APOL3O95236 402 aa5.93□□□□□ -1.46
CCDC38-206ENST00000548771 NEK4P51957 841 aa5.93□□□□□ -1.46
CCDC38-206ENST00000548771 NANOS3P60323 173 aaKnown RBP5.93□□□□□ -1.46
CCDC38-206ENST00000548771 KIAA0907Q7Z7F0 614 aaPredicted RBP5.93□□□□□ -1.46
CCDC38-206ENST00000548771 LYSMD2Q8IV50 215 aa5.93□□□□□ -1.46
CCDC38-206ENST00000548771 SLC41A1Q8IVJ1 513 aa5.93□□□□□ -1.46
CCDC38-206ENST00000548771 NIM1KQ8IY84 436 aa5.93□□□□□ -1.46
CCDC38-206ENST00000548771 GSPT2Q8IYD1 628 aaKnown RBP5.93□□□□□ -1.46
CCDC38-206ENST00000548771 ELOA2Q8IYF1 753 aaPredicted RBP5.93□□□□□ -1.46
CCDC38-206ENST00000548771 ZNF610Q8N9Z0 462 aa5.93□□□□□ -1.46
CCDC38-206ENST00000548771 FDXACB1Q9BRP7 624 aaPredicted RBP5.93□□□□□ -1.46
CCDC38-206ENST00000548771 TARS2Q9BW92 718 aaKnown RBP5.93□□□□□ -1.46
CCDC38-206ENST00000548771 ING3Q9NXR8 418 aa5.93□□□□□ -1.46
CCDC38-206ENST00000548771 RCAN3Q9UKA8 241 aa5.93□□□□□ -1.46
CCDC38-206ENST00000548771 WDR33Q9C0J8 1336 aaKnown RBP5.93□□□□□ -1.46
CCDC38-206ENST00000548771 MFAP3LO75121 409 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 LY86O95711 162 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 HNRNPA0Q13151 305 aaKnown RBP5.92□□□□□ -1.46
CCDC38-206ENST00000548771 CRHR2Q13324 411 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 TERF2Q15554 542 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 ZNF662Q6ZS27 426 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 ESPNLQ6ZVH7 1005 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 RHOUQ7L0Q8 258 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 PASD1Q8IV76 773 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 NEU4Q8WWR8 484 aaPredicted RBP5.92□□□□□ -1.46
CCDC38-206ENST00000548771 CLIP3Q96DZ5 547 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 UIMC1Q96RL1 719 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 GPR87Q9BY21 358 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 SPTLC3Q9NUV7 552 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 MSRAQ9UJ68 235 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 PCDHB6Q9Y5E3 794 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 TNFRSF18Q9Y5U5 241 aa5.92□□□□□ -1.46
CCDC38-206ENST00000548771 A0A087X0B3 334 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 PRSS38A1L453 326 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 HOXA3O43365 443 aaPredicted RBP5.91□□□□□ -1.46
CCDC38-206ENST00000548771 PCDH8O95206 1070 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 CFBP00751 764 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 ADH4P08319 380 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 GPR15P49685 360 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 KPNA1P52294 538 aaPredicted RBP5.91□□□□□ -1.46
CCDC38-206ENST00000548771 INHBCP55103 352 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 NPEPPSP55786 919 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 CNGB1Q14028 1251 aaPredicted RBP5.91□□□□□ -1.46
CCDC38-206ENST00000548771 RABL3Q5HYI8 236 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 METTL24Q5JXM2 366 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms