RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZSWIM6Q9HCJ5 1215 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 C1orf112Q9NSG2 853 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 KDM3AQ9Y4C1 1321 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 DOCK6Q96HP0 2047 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 TMEM8BA6NDV4 472 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 ZBTB43O43298 467 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 METAP2P50579 478 aaKnown RBP eCLIP15.92■□□□□ 0.14
PTCH1-217ENST00000548420 EVCP57679 992 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 PRR23BQ6ZRT6 265 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 Q6ZUG5 572 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 MICU3Q86XE3 530 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 CMTR1Q8N1G2 835 aaKnown RBP15.92■□□□□ 0.14
PTCH1-217ENST00000548420 CELF5Q8N6W0 485 aaKnown RBP15.92■□□□□ 0.14
PTCH1-217ENST00000548420 SHDQ96IW2 340 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 BBC3Q96PG8 261 aaPredicted RBP15.92■□□□□ 0.14
PTCH1-217ENST00000548420 OSBPL6Q9BZF3 934 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 LTB4R2Q9NPC1 389 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 RBM28Q9NW13 759 aaKnown RBP15.92■□□□□ 0.14
PTCH1-217ENST00000548420 RAB23Q9ULC3 237 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 NUMBLQ9Y6R0 609 aa15.92■□□□□ 0.14
PTCH1-217ENST00000548420 KLF18A0A0U1RQI7 1052 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 DENND3A2RUS2 1198 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 CTSAP10619 480 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 LAMP2P13473 410 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 TARSP26639 723 aaKnown RBP15.91■□□□□ 0.14
PTCH1-217ENST00000548420 CCND2P30279 289 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 TCF7P36402 384 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-217ENST00000548420 CLCN4P51793 760 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 NEDD9Q14511 834 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 RUFY3Q7L099 469 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 RAB11FIP4Q86YS3 637 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 LURAP1LQ8IV03 231 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 BCL7CQ8WUZ0 217 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-217ENST00000548420 TRAPPC12Q8WVT3 735 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 ZCCHC14Q8WYQ9 949 aaKnown RBP15.91■□□□□ 0.14
PTCH1-217ENST00000548420 ADAM33Q9BZ11 813 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 ELAC1Q9H777 363 aaKnown RBP15.91■□□□□ 0.14
PTCH1-217ENST00000548420 ST3GAL5Q9UNP4 418 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 CLUHO75153 1309 aa15.91■□□□□ 0.14
PTCH1-217ENST00000548420 NID2Q14112 1375 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 GSTTP1A0A1W2PQM5 241 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 GIPC1O14908 333 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 INSRRP14616 1297 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 CDC27P30260 824 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 RBM25P49756 843 aaKnown RBP15.9■□□□□ 0.14
PTCH1-217ENST00000548420 MTAPQ13126 283 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 DSC3Q14574 896 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 SF3A2Q15428 464 aaKnown RBP15.9■□□□□ 0.14
PTCH1-217ENST00000548420 MLF2Q15773 248 aaPredicted RBP15.9■□□□□ 0.14
PTCH1-217ENST00000548420 RTN1Q16799 776 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 SLC44A4Q53GD3 710 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 CLLU1OSQ5K130 101 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 LRRC43Q8N309 656 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 PIBF1Q8WXW3 757 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 BRF1Q92994 677 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 INPP4AQ96PE3 977 aaPredicted RBP15.9■□□□□ 0.14
PTCH1-217ENST00000548420 VN1R3Q9BXE9 311 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 FAM126AQ9BYI3 521 aaPredicted RBP15.9■□□□□ 0.14
PTCH1-217ENST00000548420 GREB1Q4ZG55 1949 aa15.9■□□□□ 0.14
PTCH1-217ENST00000548420 SHISA7A6NL88 538 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 GCOM1H8Y6P7 765 aaPredicted RBP15.89■□□□□ 0.13
PTCH1-217ENST00000548420 M0QZ92 97 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 PIK3CDO00329 1044 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 HRO43593 1189 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 POLR2MP0CAP2 368 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 BCAR1P56945 870 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 KRT76Q01546 638 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 FOXC1Q12948 553 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 SRSF5Q13243 272 aaKnown RBP15.89■□□□□ 0.13
PTCH1-217ENST00000548420 PSAPL1Q6NUJ1 521 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 CCDC82Q8N4S0 544 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 CMASQ8NFW8 434 aaPredicted RBP15.89■□□□□ 0.13
PTCH1-217ENST00000548420 KLHL5Q96PQ7 755 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 LSM14BQ9BX40 385 aaKnown RBP15.89■□□□□ 0.13
PTCH1-217ENST00000548420 RTEL1Q9NZ71 1219 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 SEC63Q9UGP8 760 aaKnown RBP15.89■□□□□ 0.13
PTCH1-217ENST00000548420 PCDHA2Q9Y5H9 948 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 CNTNAP5Q8WYK1 1306 aa15.89■□□□□ 0.13
PTCH1-217ENST00000548420 CCDC195A0A1B0GUA6 201 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 SPDYE4A6NLX3 237 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 GOLGA8AA7E2F4 631 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 GOLGA8BA8MQT2 603 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 MEIS2O14770 477 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 RPS6KA5O75582 802 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 MYBP10242 640 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 ADD1P35611 737 aaKnown RBP15.88■□□□□ 0.13
PTCH1-217ENST00000548420 MAGEA9P43362 315 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 ANAPC15P60006 121 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 FGD1P98174 961 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 TOB2Q14106 344 aaPredicted RBP15.88■□□□□ 0.13
PTCH1-217ENST00000548420 TMEM87AQ8NBN3 555 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 ADAM32Q8TC27 787 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 FGF14Q92915 247 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 DACH1Q9UI36 760 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 CYP46A1Q9Y6A2 500 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 FRMPD4Q14CM0 1322 aa15.88■□□□□ 0.13
PTCH1-217ENST00000548420 CCDC196A0A1B0GTZ2 297 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 hCG_1642624A0A1W2PR95 340 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 EIF5BO60841 1220 aaKnown RBP15.87■□□□□ 0.13
PTCH1-217ENST00000548420 CNPP09543 421 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms