RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 FAM105AQ9NUU6 356 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 DDX19AQ9NUU7 478 aaKnown RBP17.64■□□□□ 0.41
DDX54-204ENST00000546898 RNF19AQ9NV58 838 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 KIAA1024Q9UPX6 916 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 PRUNE2Q8WUY3 3088 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 MYO7AQ13402 2215 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 ZNF623O75123 536 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 CYP11B2P19099 503 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 SYT1P21579 422 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 SKIV2LQ15477 1246 aaKnown RBP17.63■□□□□ 0.41
DDX54-204ENST00000546898 CSPP1Q1MSJ5 1256 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 HSCBQ8IWL3 235 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 RNF169Q8NCN4 708 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 ATXN2LQ8WWM7 1075 aaKnown RBP17.63■□□□□ 0.41
DDX54-204ENST00000546898 CCDC51Q96ER9 411 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 CASD1Q96PB1 797 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 MRPL9Q9BYD2 267 aaKnown RBP17.63■□□□□ 0.41
DDX54-204ENST00000546898 BHMT2Q9H2M3 363 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 PRDM6Q9NQX0 595 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 COG5Q9UP83 839 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 PCDHB12Q9Y5F1 795 aa17.63■□□□□ 0.41
DDX54-204ENST00000546898 SPTBN5Q9NRC6 3674 aaKnown RBP17.62■□□□□ 0.41
DDX54-204ENST00000546898 VWA3AA6NCI4 1184 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 PP2D1A8MPX8 630 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 INO80B-WBP1J3KQ70 363 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 SLC26A4O43511 780 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 EYA4O95677 639 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 LAG3P18627 525 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 MBTD1Q05BQ5 628 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 NCBP1Q09161 790 aaKnown RBP17.62■□□□□ 0.41
DDX54-204ENST00000546898 CLLU1OSQ5K130 101 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 HYIQ5T013 277 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 SPOUT1Q5T280 376 aaKnown RBP17.62■□□□□ 0.41
DDX54-204ENST00000546898 PGBD4Q96DM1 585 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 AK8Q96MA6 479 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 COL25A1Q9BXS0 654 aaPredicted RBP17.62■□□□□ 0.41
DDX54-204ENST00000546898 NT5C3AQ9H0P0 336 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 GPRC5CQ9NQ84 441 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 TYW1Q9NV66 732 aaKnown RBP17.62■□□□□ 0.41
DDX54-204ENST00000546898 DNM3Q9UQ16 869 aa17.62■□□□□ 0.41
DDX54-204ENST00000546898 LRRIQ4A6NIV6 560 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 GRM6O15303 877 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 TSPAN1O60635 241 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 HOXA11P31270 313 aaPredicted RBP17.61■□□□□ 0.41
DDX54-204ENST00000546898 PPP2R5AQ15172 486 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 CDCA2Q69YH5 1023 aaPredicted RBP17.61■□□□□ 0.41
DDX54-204ENST00000546898 NOTUMQ6P988 496 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 MAEAQ7L5Y9 396 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 ZBTB8OSQ8IWT0 167 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 KLHL23Q8NBE8 558 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 COLGALT1Q8NBJ5 622 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 CNNM3Q8NE01 707 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 HELQQ8TDG4 1101 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 KIFAP3Q92845 792 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 PRIMPOLQ96LW4 560 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 MMTAG2Q9BU76 263 aaKnown RBP17.61■□□□□ 0.41
DDX54-204ENST00000546898 C2orf40Q9H1Z8 148 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 NSUN3Q9H649 340 aaKnown RBP17.61■□□□□ 0.41
DDX54-204ENST00000546898 CWH43Q9H720 699 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 PLAGL2Q9UPG8 496 aa17.61■□□□□ 0.41
DDX54-204ENST00000546898 TDRD15B5MCY1 1934 aaKnown RBP17.6■□□□□ 0.41
DDX54-204ENST00000546898 CARNS1A5YM72 827 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 E9PMD0 336 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 ITGB1P05556 798 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 CDC25AP30304 524 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 NAMPTP43490 491 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 UBE3AQ05086 875 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 RESTQ13127 1097 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 SF3A1Q15459 793 aaKnown RBP17.6■□□□□ 0.41
DDX54-204ENST00000546898 AMHR2Q16671 573 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 AAK1Q2M2I8 961 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 TJAP1Q5JTD0 557 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 PPP4R3CPQ6ZMV5 832 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 MRPL10Q7Z7H8 261 aaKnown RBP17.6■□□□□ 0.41
DDX54-204ENST00000546898 PRMT7Q9NVM4 692 aaPredicted RBP17.6■□□□□ 0.41
DDX54-204ENST00000546898 PCDHB2Q9Y5E7 798 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 CNTNAP2Q9UHC6 1331 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 REV3LO60673 3130 aa17.6■□□□□ 0.41
DDX54-204ENST00000546898 PPM1AP35813 382 aa17.59■□□□□ 0.41
DDX54-204ENST00000546898 MRPS5P82675 430 aaKnown RBP17.59■□□□□ 0.41
DDX54-204ENST00000546898 UBXN11Q5T124 520 aa17.59■□□□□ 0.41
DDX54-204ENST00000546898 GLB1LQ6UWU2 654 aa17.59■□□□□ 0.41
DDX54-204ENST00000546898 SPPL3Q8TCT6 385 aa17.59■□□□□ 0.41
DDX54-204ENST00000546898 HLA-CQ95604 372 aa17.59■□□□□ 0.41
DDX54-204ENST00000546898 CDK5RAP3Q96JB5 506 aa17.59■□□□□ 0.41
DDX54-204ENST00000546898 IFT74Q96LB3 600 aa17.59■□□□□ 0.41
DDX54-204ENST00000546898 ZSCAN16Q9H4T2 348 aaPredicted RBP17.59■□□□□ 0.41
DDX54-204ENST00000546898 ALG13Q9NP73 1137 aaKnown RBP17.59■□□□□ 0.41
DDX54-204ENST00000546898 MTMR6Q9Y217 621 aa17.59■□□□□ 0.41
DDX54-204ENST00000546898 STX6O43752 255 aa17.58■□□□□ 0.4
DDX54-204ENST00000546898 PDIA4P13667 645 aaKnown RBP17.58■□□□□ 0.4
DDX54-204ENST00000546898 ARF4P18085 180 aaPredicted RBP17.58■□□□□ 0.4
DDX54-204ENST00000546898 NCLP19338 710 aaKnown RBP17.58■□□□□ 0.4
DDX54-204ENST00000546898 LONP1P36776 959 aaKnown RBP17.58■□□□□ 0.4
DDX54-204ENST00000546898 FAM187BQ17R55 369 aa17.58■□□□□ 0.4
DDX54-204ENST00000546898 LRRC55Q6ZSA7 311 aa17.58■□□□□ 0.4
DDX54-204ENST00000546898 THNSL1Q8IYQ7 743 aa17.58■□□□□ 0.4
DDX54-204ENST00000546898 POF1BQ8WVV4 589 aa17.58■□□□□ 0.4
DDX54-204ENST00000546898 BSNDQ8WZ55 320 aa17.58■□□□□ 0.4
DDX54-204ENST00000546898 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms