RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 KRT40Q6A162 431 aa6.25□□□□□ -1.41
CCDC38-204ENST00000546816 LRRC55Q6ZSA7 311 aa6.25□□□□□ -1.41
CCDC38-204ENST00000546816 CMTM4Q8IZR5 234 aa6.25□□□□□ -1.41
CCDC38-204ENST00000546816 SYNE4Q8N205 404 aa6.25□□□□□ -1.41
CCDC38-204ENST00000546816 PROKR1Q8TCW9 393 aa6.25□□□□□ -1.41
CCDC38-204ENST00000546816 DRC1Q96MC2 740 aa6.25□□□□□ -1.41
CCDC38-204ENST00000546816 PIF1Q9H611 641 aa6.25□□□□□ -1.41
CCDC38-204ENST00000546816 COL4A3Q01955 1670 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 MTSS1O43312 755 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 RFPL3O75679 317 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 ASMTLO95671 621 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 NUDT3O95989 172 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 ZFP36P26651 326 aaKnown RBP6.24□□□□□ -1.41
CCDC38-204ENST00000546816 IL12RB1P42701 662 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 KIR2DL3P43628 341 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 MYBPC3Q14896 1274 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 DCAF17Q5H9S7 520 aaPredicted RBP6.24□□□□□ -1.41
CCDC38-204ENST00000546816 ST8SIA2Q92186 375 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 UBXN4Q92575 508 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 ARL8AQ96BM9 186 aa6.24□□□□□ -1.41
CCDC38-204ENST00000546816 C14orf93Q9H972 538 aaKnown RBP6.24□□□□□ -1.41
CCDC38-204ENST00000546816 PTPDC1A2A3K4 754 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 DAPK3O43293 454 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 STC2O76061 302 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 ABHD16AO95870 558 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 CYP17A1P05093 508 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 BCAR1P56945 870 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 PABPC4Q13310 644 aaKnown RBP eCLIP6.23□□□□□ -1.41
CCDC38-204ENST00000546816 PTPAQ15257 358 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 EPHA7Q15375 998 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 PIK3R6Q5UE93 754 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 PRAMEF9Q5VWM5 478 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 CDCA2Q69YH5 1023 aaPredicted RBP6.23□□□□□ -1.41
CCDC38-204ENST00000546816 CXorf67Q86X51 503 aaPredicted RBP6.23□□□□□ -1.41
CCDC38-204ENST00000546816 NTN5Q8WTR8 489 aaPredicted RBP6.23□□□□□ -1.41
CCDC38-204ENST00000546816 TUBGCP5Q96RT8 1024 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 PITHD1Q9GZP4 211 aaPredicted RBP6.23□□□□□ -1.41
CCDC38-204ENST00000546816 B4GALT6Q9UBX8 382 aa6.23□□□□□ -1.41
CCDC38-204ENST00000546816 A0A0A6YYJ9 748 aa6.22□□□□□ -1.41
CCDC38-204ENST00000546816 CBX4O00257 560 aa6.22□□□□□ -1.41
CCDC38-204ENST00000546816 JMJD7P0C870 316 aa6.22□□□□□ -1.41
CCDC38-204ENST00000546816 NPEPPSP55786 919 aa6.22□□□□□ -1.41
CCDC38-204ENST00000546816 CREB3L3Q68CJ9 461 aa6.22□□□□□ -1.41
CCDC38-204ENST00000546816 KANSL1Q7Z3B3 1105 aa6.22□□□□□ -1.41
CCDC38-204ENST00000546816 APBB1IPQ7Z5R6 666 aaPredicted RBP6.22□□□□□ -1.41
CCDC38-204ENST00000546816 ZNF764Q96H86 408 aaPredicted RBP6.22□□□□□ -1.41
CCDC38-204ENST00000546816 RNPC3Q96LT9 517 aaKnown RBP6.22□□□□□ -1.41
CCDC38-204ENST00000546816 ENKD1Q9H0I2 346 aa6.22□□□□□ -1.41
CCDC38-204ENST00000546816 NCDNQ9UBB6 729 aa6.22□□□□□ -1.41
CCDC38-204ENST00000546816 A0A0A6YYK5 440 aaPredicted RBP6.21□□□□□ -1.42
CCDC38-204ENST00000546816 PPFIA4O75335 1185 aa6.21□□□□□ -1.42
CCDC38-204ENST00000546816 PTX3P26022 381 aaPredicted RBP6.21□□□□□ -1.42
CCDC38-204ENST00000546816 KCNV1Q6PIU1 500 aa6.21□□□□□ -1.42
CCDC38-204ENST00000546816 NME9Q86XW9 330 aa6.21□□□□□ -1.42
CCDC38-204ENST00000546816 KIAA1958Q8N8K9 716 aa6.21□□□□□ -1.42
CCDC38-204ENST00000546816 RPGRQ92834 1020 aaKnown RBP6.21□□□□□ -1.42
CCDC38-204ENST00000546816 SOX7Q9BT81 388 aa6.21□□□□□ -1.42
CCDC38-204ENST00000546816 OSBPL6Q9BZF3 934 aa6.21□□□□□ -1.42
CCDC38-204ENST00000546816 CABP5Q9NP86 173 aa6.21□□□□□ -1.42
CCDC38-204ENST00000546816 SORCS3Q9UPU3 1222 aa6.21□□□□□ -1.42
CCDC38-204ENST00000546816 FAM83GA6ND36 823 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 TRIM24O15164 1050 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 GNAT2P19087 354 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 PLEKHG4Q58EX7 1191 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 LRCH2Q5VUJ6 765 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 UBE2R2Q712K3 238 aaPredicted RBP6.2□□□□□ -1.42
CCDC38-204ENST00000546816 CPT1CQ8TCG5 803 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 ORAI3Q9BRQ5 295 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 TOR3AQ9H497 397 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 PCIF1Q9H4Z3 704 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 RIOX1Q9H6W3 641 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 SYNPO2LQ9H987 977 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 ZNHIT2Q9UHR6 403 aa6.2□□□□□ -1.42
CCDC38-204ENST00000546816 H7C1D1 291 aa6.19□□□□□ -1.42
CCDC38-204ENST00000546816 B3GALT2O43825 422 aa6.19□□□□□ -1.42
CCDC38-204ENST00000546816 HK1P19367 917 aa6.19□□□□□ -1.42
CCDC38-204ENST00000546816 SLC9A1P19634 815 aa6.19□□□□□ -1.42
CCDC38-204ENST00000546816 PTTG1IPP53801 180 aa6.19□□□□□ -1.42
CCDC38-204ENST00000546816 CFAP100Q494V2 611 aa6.19□□□□□ -1.42
CCDC38-204ENST00000546816 BBC3Q96PG8 261 aaPredicted RBP6.19□□□□□ -1.42
CCDC38-204ENST00000546816 ELF4Q99607 663 aaPredicted RBP6.19□□□□□ -1.42
CCDC38-204ENST00000546816 ZNF768Q9H5H4 540 aaKnown RBP6.19□□□□□ -1.42
CCDC38-204ENST00000546816 INTS7Q9NVH2 962 aaKnown RBP6.19□□□□□ -1.42
CCDC38-204ENST00000546816 MAGEC2Q9UBF1 373 aaPredicted RBP6.19□□□□□ -1.42
CCDC38-204ENST00000546816 SYNPO2Q9UMS6 1093 aa6.19□□□□□ -1.42
CCDC38-204ENST00000546816 ZAR1LA6NP61 321 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 AHRRA9YTQ3 701 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 HOXA3O43365 443 aaPredicted RBP6.18□□□□□ -1.42
CCDC38-204ENST00000546816 LMO1P25800 156 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 FLT3P36888 993 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 RANGAP1P46060 587 aaPredicted RBP6.18□□□□□ -1.42
CCDC38-204ENST00000546816 ADCY2Q08462 1091 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 ADCY1Q08828 1119 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 ZNF174Q15697 407 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 C21orf62-AS1Q17RA5 79 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 FAM214AQ32MH5 1076 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 TIGD2Q4W5G0 525 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 METTL24Q5JXM2 366 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 HECTD2Q5U5R9 776 aa6.18□□□□□ -1.42
CCDC38-204ENST00000546816 ESRP1Q6NXG1 681 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms