RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ASAP2O43150 1006 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 EYA4O95677 639 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 GLP2RO95838 553 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 SRGAP2CP0DJJ0 459 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 LAMTOR4Q0VGL1 99 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 SAFBQ15424 915 aaKnown RBP eCLIP25.37■■□□□ 1.65
CHD4-214ENST00000545942 HSD17B14Q9BPX1 270 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 AGPAT5Q9NUQ2 364 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 C19orf67A6NJJ6 358 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 WNT7AO00755 349 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 PER2O15055 1255 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 ZNF623O75123 536 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 LYPLA2O95372 231 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 TXKP42681 527 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 COASYQ13057 564 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 TMEM31Q5JXX7 168 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 FERMT3Q86UX7 667 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 CCDC83Q8IWF9 413 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 SMRP1Q8NCR6 262 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 MTMR9Q96QG7 549 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 POP1Q99575 1024 aaKnown RBP25.37■■□□□ 1.65
CHD4-214ENST00000545942 MTRQ99707 1265 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 TCF25Q9BQ70 676 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 LLPHQ9BRT6 129 aaKnown RBP25.37■■□□□ 1.65
CHD4-214ENST00000545942 NGRNQ9NPE2 291 aaKnown RBP25.37■■□□□ 1.65
CHD4-214ENST00000545942 ENTPD7Q9NQZ7 604 aa25.37■■□□□ 1.65
CHD4-214ENST00000545942 BARX2Q9UMQ3 279 aaPredicted RBP25.37■■□□□ 1.65
CHD4-214ENST00000545942 ALDH7A1P49419 539 aaKnown RBP25.36■■□□□ 1.65
CHD4-214ENST00000545942 DUSP6Q16828 381 aa25.36■■□□□ 1.65
CHD4-214ENST00000545942 PLPP4Q5VZY2 271 aa25.36■■□□□ 1.65
CHD4-214ENST00000545942 GLB1LQ6UWU2 654 aa25.36■■□□□ 1.65
CHD4-214ENST00000545942 SLC39A11Q8N1S5 342 aa25.36■■□□□ 1.65
CHD4-214ENST00000545942 RNF149Q8NC42 400 aa25.36■■□□□ 1.65
CHD4-214ENST00000545942 LPPQ93052 612 aa25.36■■□□□ 1.65
CHD4-214ENST00000545942 LRFN3Q9BTN0 628 aa25.36■■□□□ 1.65
CHD4-214ENST00000545942 GPR37L1O60883 481 aa25.35■■□□□ 1.65
CHD4-214ENST00000545942 ALADP13716 330 aa25.35■■□□□ 1.65
CHD4-214ENST00000545942 GUCY1B3Q02153 619 aa25.35■■□□□ 1.65
CHD4-214ENST00000545942 LONRF3Q496Y0 759 aa25.35■■□□□ 1.65
CHD4-214ENST00000545942 C8orf76Q96K31 380 aa25.35■■□□□ 1.65
CHD4-214ENST00000545942 MINDY3Q9H8M7 445 aa25.35■■□□□ 1.65
CHD4-214ENST00000545942 BCAR1P56945 870 aa25.34■■□□□ 1.65
CHD4-214ENST00000545942 MXD4Q14582 209 aaPredicted RBP25.34■■□□□ 1.65
CHD4-214ENST00000545942 TMC7Q7Z402 723 aa25.34■■□□□ 1.65
CHD4-214ENST00000545942 PGBD4Q96DM1 585 aa25.34■■□□□ 1.65
CHD4-214ENST00000545942 ZSCAN31Q96LW9 406 aaPredicted RBP25.34■■□□□ 1.65
CHD4-214ENST00000545942 C11orf16Q9NQ32 467 aa25.34■■□□□ 1.65
CHD4-214ENST00000545942 XPNPEP1Q9NQW7 623 aa25.34■■□□□ 1.65
CHD4-214ENST00000545942 ANKEF1Q9NU02 776 aa25.34■■□□□ 1.65
CHD4-214ENST00000545942 PCDHB2Q9Y5E7 798 aa25.34■■□□□ 1.65
CHD4-214ENST00000545942 CARNS1A5YM72 827 aa25.33■■□□□ 1.64
CHD4-214ENST00000545942 DGAT1O75907 488 aa25.33■■□□□ 1.64
CHD4-214ENST00000545942 SRGAP2BP0DMP2 458 aa25.33■■□□□ 1.64
CHD4-214ENST00000545942 ATP2B1P20020 1258 aa25.33■■□□□ 1.64
CHD4-214ENST00000545942 MCM7P33993 719 aa25.33■■□□□ 1.64
CHD4-214ENST00000545942 NOMO2Q5JPE7 1267 aa25.33■■□□□ 1.64
CHD4-214ENST00000545942 VN1R2Q8NFZ6 395 aa25.33■■□□□ 1.64
CHD4-214ENST00000545942 CCDC43Q96MW1 224 aaKnown RBP25.33■■□□□ 1.64
CHD4-214ENST00000545942 TMEM60Q9H2L4 133 aa25.33■■□□□ 1.64
CHD4-214ENST00000545942 RAPGEFL1Q9UHV5 662 aa25.33■■□□□ 1.64
CHD4-214ENST00000545942 MEIS3P2A8K0S8 358 aa25.32■■□□□ 1.64
CHD4-214ENST00000545942 HIDE1A8MVS5 230 aa25.32■■□□□ 1.64
CHD4-214ENST00000545942 ZC3H11AO75152 810 aaKnown RBP eCLIP25.32■■□□□ 1.64
CHD4-214ENST00000545942 OFD1O75665 1012 aa25.32■■□□□ 1.64
CHD4-214ENST00000545942 HOXA11P31270 313 aaPredicted RBP25.32■■□□□ 1.64
CHD4-214ENST00000545942 HMGN5P82970 282 aaKnown RBP25.32■■□□□ 1.64
CHD4-214ENST00000545942 RBM10P98175 930 aaKnown RBP25.32■■□□□ 1.64
CHD4-214ENST00000545942 PCBP1Q15365 356 aaKnown RBP eCLIP25.32■■□□□ 1.64
CHD4-214ENST00000545942 FOXP1Q9H334 677 aaPredicted RBP25.32■■□□□ 1.64
CHD4-214ENST00000545942 SH2B1Q9NRF2 756 aaPredicted RBP25.32■■□□□ 1.64
CHD4-214ENST00000545942 TBC1D13Q9NVG8 400 aa25.32■■□□□ 1.64
CHD4-214ENST00000545942 INPP5FQ9Y2H2 1132 aa25.32■■□□□ 1.64
CHD4-214ENST00000545942 FAM86C2PA6NEL3 165 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 POTEMA6NI47 508 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 NT5C1B-RDH14C9J2C7 533 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 DCXO43602 365 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 ERLIN2O94905 339 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 RARRES1P49788 294 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 TFDP1Q14186 410 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 C8orf34Q49A92 452 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 TMEM184AQ6ZMB5 413 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 TMEM169Q96HH4 297 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 KIF2CQ99661 725 aa25.31■■□□□ 1.64
CHD4-214ENST00000545942 USP15Q9Y4E8 981 aaPredicted RBP25.31■■□□□ 1.64
CHD4-214ENST00000545942 XRCC6P12956 609 aaKnown RBP eCLIP25.3■■□□□ 1.64
CHD4-214ENST00000545942 PTENP60484 403 aa25.3■■□□□ 1.64
CHD4-214ENST00000545942 RNASELQ05823 741 aaKnown RBP25.3■■□□□ 1.64
CHD4-214ENST00000545942 POU5F1BQ06416 359 aa25.3■■□□□ 1.64
CHD4-214ENST00000545942 KCNC3Q14003 757 aa25.3■■□□□ 1.64
CHD4-214ENST00000545942 SMC1AQ14683 1233 aaKnown RBP25.3■■□□□ 1.64
CHD4-214ENST00000545942 BMS1Q14692 1282 aaKnown RBP25.3■■□□□ 1.64
CHD4-214ENST00000545942 MRPL10Q7Z7H8 261 aaKnown RBP25.3■■□□□ 1.64
CHD4-214ENST00000545942 PIGOQ8TEQ8 1089 aa25.3■■□□□ 1.64
CHD4-214ENST00000545942 NRDE2Q9H7Z3 1164 aa25.3■■□□□ 1.64
CHD4-214ENST00000545942 ORC2Q13416 577 aaPredicted RBP25.29■■□□□ 1.64
CHD4-214ENST00000545942 UBXN11Q5T124 520 aa25.29■■□□□ 1.64
CHD4-214ENST00000545942 AGMOQ6ZNB7 445 aa25.29■■□□□ 1.64
CHD4-214ENST00000545942 MRPL43Q8N983 215 aaKnown RBP25.29■■□□□ 1.64
CHD4-214ENST00000545942 FAM184AQ8NB25 1140 aa25.29■■□□□ 1.64
CHD4-214ENST00000545942 FBXO18Q8NFZ0 1043 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms