RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 KNOP1Q1ED39 458 aaKnown RBP17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 EDRF1Q3B7T1 1238 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 CENPPQ6IPU0 288 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 ZPBP2Q6X784 338 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 HS2ST1Q7LGA3 356 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 NECAB2Q7Z6G3 386 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 RNF149Q8NC42 400 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 SCFD1Q8WVM8 642 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 BSNDQ8WZ55 320 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 TSG101Q99816 390 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 GCOM2Q9BZD3 368 aaPredicted RBP17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 C11orf49Q9H6J7 331 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 PRMT7Q9NVM4 692 aaPredicted RBP17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 GDAQ9Y2T3 454 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 TANC1Q9C0D5 1861 aa17.62■□□□□ 0.41
PRPF40A-212ENST00000545856 DENND3A2RUS2 1198 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 SFI1A8K8P3 1242 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 SMTNL1A8MU46 457 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 K7ERI5 159 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 PRCPP42785 496 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 ZNF165P49910 485 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 CRYBB1P53674 252 aaPredicted RBP17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 DRP2Q13474 957 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 MAPK6Q16659 721 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 ANO6Q4KMQ2 910 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 FAM126BQ8IXS8 530 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 USP38Q8NB14 1042 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 ENOX1Q8TC92 643 aaKnown RBP17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 TYW1Q9NV66 732 aaKnown RBP17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 TRAF3IP3Q9Y228 551 aa17.61■□□□□ 0.41
PRPF40A-212ENST00000545856 PITPNM1O00562 1244 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 CALUO43852 315 aaPredicted RBP17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 FGFR1OPO95684 399 aaKnown RBP17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 CD4P01730 458 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 MRPS6P82932 125 aaKnown RBP17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 BFSP2Q13515 415 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 FAM26DQ5JW98 314 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 SLC39A5Q6ZMH5 540 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 C12orf56Q8IXR9 622 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 NOC3LQ8WTT2 800 aaKnown RBP17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 P2RX5Q93086 422 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 CCDC113Q9H0I3 377 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 GBP3Q9H0R5 595 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 FZD8Q9H461 694 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 TBX20Q9UMR3 447 aa17.6■□□□□ 0.41
PRPF40A-212ENST00000545856 DCDC2CA8MYV0 355 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 SLC16A4O15374 487 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 GPR32O75388 356 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 MYCP01106 439 aaPredicted RBP17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 SFPQP23246 707 aaKnown RBP eCLIP17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 RPL13P26373 211 aaKnown RBP17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 NMT1P30419 496 aaKnown RBP17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 AXLP30530 894 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 SOX10P56693 466 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 NLRP11P59045 1033 aaKnown RBP17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 MYL5Q02045 173 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 NCBP1Q09161 790 aaKnown RBP17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 HIC1Q14526 733 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 RUFY4Q6ZNE9 571 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 APBB1IPQ7Z5R6 666 aaPredicted RBP17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 SLC9A9Q8IVB4 645 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 DNAJB3Q8WWF6 145 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 NLRP7Q8WX94 980 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 NLRP4Q96MN2 994 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 CTAGE1Q96RT6 745 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 MRPL4Q9BYD3 311 aaKnown RBP17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 SENP6Q9GZR1 1112 aaPredicted RBP17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 FAM49AQ9H0Q0 323 aaPredicted RBP17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 DNAJC25Q9H1X3 360 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 ADAMTS10Q9H324 1103 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 KCTD10Q9H3F6 313 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 IFT122Q9HBG6 1241 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 TRPV2Q9Y5S1 764 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 ADGRA3Q8IWK6 1321 aa17.59■□□□□ 0.41
PRPF40A-212ENST00000545856 ACKR2O00590 384 aa17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 MYBP10242 640 aa17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 DARSP14868 501 aaKnown RBP17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 EIF4BP23588 611 aaKnown RBP17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 TPM4P67936 248 aa17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 MBTD1Q05BQ5 628 aa17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 TRIM71Q2Q1W2 868 aaKnown RBP17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 ZCWPW2Q504Y3 356 aa17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 SLFN12LQ6IEE8 588 aa17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 NELFBQ8WX92 580 aa17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 CCDC51Q96ER9 411 aa17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 SCLT1Q96NL6 688 aa17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 CELF4Q9BZC1 486 aaKnown RBP17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 TBC1D7Q9P0N9 293 aa17.58■□□□□ 0.4
PRPF40A-212ENST00000545856 BECN2A8MW95 431 aa17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 B4GALT4O60513 344 aa17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 VTNP04004 478 aa17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 SRGAP2CP0DJJ0 459 aa17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 CASP5P51878 434 aa17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 FKBP3Q00688 224 aaKnown RBP17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 UBE2Q1Q7Z7E8 422 aa17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 SYCP3Q8IZU3 236 aa17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 HPS3Q969F9 1004 aa17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 CEP63Q96MT8 703 aa17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 BRCA2P51587 3418 aa17.57■□□□□ 0.4
PRPF40A-212ENST00000545856 CNTNAP2Q9UHC6 1331 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms