RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 LAMTOR4Q0VGL1 99 aa22.18■■□□□ 1.14
CHD4-213ENST00000545584 SMAD2Q15796 467 aaKnown RBP22.18■■□□□ 1.14
CHD4-213ENST00000545584 ADHFE1Q8IWW8 467 aa22.18■■□□□ 1.14
CHD4-213ENST00000545584 PGBD4Q96DM1 585 aa22.18■■□□□ 1.14
CHD4-213ENST00000545584 POP1Q99575 1024 aaKnown RBP22.18■■□□□ 1.14
CHD4-213ENST00000545584 ENTPD7Q9NQZ7 604 aa22.18■■□□□ 1.14
CHD4-213ENST00000545584 AGPAT5Q9NUQ2 364 aa22.18■■□□□ 1.14
CHD4-213ENST00000545584 PCDHGC5Q9Y5F6 944 aa22.18■■□□□ 1.14
CHD4-213ENST00000545584 CARNS1A5YM72 827 aa22.17■■□□□ 1.14
CHD4-213ENST00000545584 LYPLA2O95372 231 aa22.17■■□□□ 1.14
CHD4-213ENST00000545584 ATP2B1P20020 1258 aa22.17■■□□□ 1.14
CHD4-213ENST00000545584 ALDH7A1P49419 539 aaKnown RBP22.17■■□□□ 1.14
CHD4-213ENST00000545584 HMGN5P82970 282 aaKnown RBP22.17■■□□□ 1.14
CHD4-213ENST00000545584 PLPP4Q5VZY2 271 aa22.17■■□□□ 1.14
CHD4-213ENST00000545584 GLB1LQ6UWU2 654 aa22.17■■□□□ 1.14
CHD4-213ENST00000545584 FERMT3Q86UX7 667 aa22.17■■□□□ 1.14
CHD4-213ENST00000545584 RNF149Q8NC42 400 aa22.17■■□□□ 1.14
CHD4-213ENST00000545584 HSD17B14Q9BPX1 270 aa22.17■■□□□ 1.14
CHD4-213ENST00000545584 TCF25Q9BQ70 676 aa22.17■■□□□ 1.14
CHD4-213ENST00000545584 NGRNQ9NPE2 291 aaKnown RBP22.17■■□□□ 1.14
CHD4-213ENST00000545584 ANKEF1Q9NU02 776 aa22.17■■□□□ 1.14
CHD4-213ENST00000545584 PI4K2BG5E9Z4 385 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 FSCN2O14926 492 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 PER2O15055 1255 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 ZBTB39O15060 712 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 ZNF623O75123 536 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 SRGAP2BP0DMP2 458 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 MCM7P33993 719 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 PBX3P40426 434 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 ZP2Q05996 745 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 MXD4Q14582 209 aaPredicted RBP22.16■■□□□ 1.14
CHD4-213ENST00000545584 BMS1Q14692 1282 aaKnown RBP22.16■■□□□ 1.14
CHD4-213ENST00000545584 DUSP6Q16828 381 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 TMEM31Q5JXX7 168 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 FAM184AQ8NB25 1140 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 KHSRPQ92945 711 aaKnown RBP eCLIP22.16■■□□□ 1.14
CHD4-213ENST00000545584 LPPQ93052 612 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 MSLNLQ96KJ4 702 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 MTMR9Q96QG7 549 aa22.16■■□□□ 1.14
CHD4-213ENST00000545584 SH2B1Q9NRF2 756 aaPredicted RBP22.16■■□□□ 1.14
CHD4-213ENST00000545584 WNT7AO00755 349 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 DGAT1O75907 488 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 ALADP13716 330 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 COASYQ13057 564 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 GNL2Q13823 731 aaKnown RBP22.15■■□□□ 1.14
CHD4-213ENST00000545584 TFDP1Q14186 410 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 LONRF3Q496Y0 759 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 TMC7Q7Z402 723 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 SLC39A11Q8N1S5 342 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 CLEC1BQ9P126 229 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 BARX2Q9UMQ3 279 aaPredicted RBP22.15■■□□□ 1.14
CHD4-213ENST00000545584 INPP5FQ9Y2H2 1132 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 PCDHB2Q9Y5E7 798 aa22.15■■□□□ 1.14
CHD4-213ENST00000545584 ERLIN2O94905 339 aa22.14■■□□□ 1.13
CHD4-213ENST00000545584 EYA4O95677 639 aa22.14■■□□□ 1.13
CHD4-213ENST00000545584 BCAR1P56945 870 aa22.14■■□□□ 1.13
CHD4-213ENST00000545584 RNASELQ05823 741 aaKnown RBP22.14■■□□□ 1.13
CHD4-213ENST00000545584 NCBP1Q09161 790 aaKnown RBP22.14■■□□□ 1.13
CHD4-213ENST00000545584 PCBP1Q15365 356 aaKnown RBP eCLIP22.14■■□□□ 1.13
CHD4-213ENST00000545584 NOMO2Q5JPE7 1267 aa22.14■■□□□ 1.13
CHD4-213ENST00000545584 TMEM169Q96HH4 297 aa22.14■■□□□ 1.13
CHD4-213ENST00000545584 FOXP1Q9H334 677 aaPredicted RBP22.14■■□□□ 1.13
CHD4-213ENST00000545584 C19orf67A6NJJ6 358 aa22.13■■□□□ 1.13
CHD4-213ENST00000545584 ZC3H11AO75152 810 aaKnown RBP eCLIP22.13■■□□□ 1.13
CHD4-213ENST00000545584 GLP2RO95838 553 aa22.13■■□□□ 1.13
CHD4-213ENST00000545584 XRCC6P12956 609 aaKnown RBP eCLIP22.13■■□□□ 1.13
CHD4-213ENST00000545584 RBM25P49756 843 aaKnown RBP22.13■■□□□ 1.13
CHD4-213ENST00000545584 ORC2Q13416 577 aaPredicted RBP22.13■■□□□ 1.13
CHD4-213ENST00000545584 C8orf34Q49A92 452 aa22.13■■□□□ 1.13
CHD4-213ENST00000545584 SMRP1Q8NCR6 262 aa22.13■■□□□ 1.13
CHD4-213ENST00000545584 URGCPQ8TCY9 931 aa22.13■■□□□ 1.13
CHD4-213ENST00000545584 TMEM60Q9H2L4 133 aa22.13■■□□□ 1.13
CHD4-213ENST00000545584 MINDY3Q9H8M7 445 aa22.13■■□□□ 1.13
CHD4-213ENST00000545584 XPNPEP1Q9NQW7 623 aa22.13■■□□□ 1.13
CHD4-213ENST00000545584 ARID2Q68CP9 1835 aa22.13■■□□□ 1.13
CHD4-213ENST00000545584 POTEMA6NI47 508 aa22.12■■□□□ 1.13
CHD4-213ENST00000545584 NT5C1B-RDH14C9J2C7 533 aa22.12■■□□□ 1.13
CHD4-213ENST00000545584 OFD1O75665 1012 aa22.12■■□□□ 1.13
CHD4-213ENST00000545584 RARRES1P49788 294 aa22.12■■□□□ 1.13
CHD4-213ENST00000545584 PTENP60484 403 aa22.12■■□□□ 1.13
CHD4-213ENST00000545584 SMC1AQ14683 1233 aaKnown RBP22.12■■□□□ 1.13
CHD4-213ENST00000545584 CNNM3Q8NE01 707 aa22.12■■□□□ 1.13
CHD4-213ENST00000545584 FBXO18Q8NFZ0 1043 aa22.12■■□□□ 1.13
CHD4-213ENST00000545584 LRFN3Q9BTN0 628 aa22.12■■□□□ 1.13
CHD4-213ENST00000545584 TUFT1Q9NNX1 390 aa22.12■■□□□ 1.13
CHD4-213ENST00000545584 TBC1D13Q9NVG8 400 aa22.12■■□□□ 1.13
CHD4-213ENST00000545584 CNTNAP2Q9UHC6 1331 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 INO80B-WBP1J3KQ70 363 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 GPR37L1O60883 481 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 AXLP30530 894 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 CA8P35219 290 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 POU5F1BQ06416 359 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 ZNF174Q15697 407 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 MRPL10Q7Z7H8 261 aaKnown RBP22.11■■□□□ 1.13
CHD4-213ENST00000545584 ERMNQ8TAM6 284 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 PIGOQ8TEQ8 1089 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 KIF2CQ99661 725 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 RSAD1Q9HA92 442 aa22.11■■□□□ 1.13
CHD4-213ENST00000545584 NOL7Q9UMY1 257 aaKnown RBP22.11■■□□□ 1.13
CHD4-213ENST00000545584 MEIS3P2A8K0S8 358 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms