RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TTC12Q9H892 705 aaPredicted RBP23.59■■□□□ 1.37
SCARB1-210ENST00000545493 FAM105AQ9NUU6 356 aa23.59■■□□□ 1.37
SCARB1-210ENST00000545493 PRKAG3Q9UGI9 489 aa23.59■■□□□ 1.37
SCARB1-210ENST00000545493 POTEMA6NI47 508 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 C19orf67A6NJJ6 358 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 PER2O15055 1255 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 GAS2O43903 313 aaKnown RBP23.58■■□□□ 1.37
SCARB1-210ENST00000545493 LYPLA2O95372 231 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 PPM1AP35813 382 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 DUSP6Q16828 381 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 FERMT3Q86UX7 667 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 TPH2Q8IWU9 490 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 ADHFE1Q8IWW8 467 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 EXOC8Q8IYI6 725 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 SLC39A11Q8N1S5 342 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 PCDHA12Q9UN75 941 aa23.58■■□□□ 1.37
SCARB1-210ENST00000545493 PI4K2BG5E9Z4 385 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 EYA4O95677 639 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 TXKP42681 527 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 RAB27AP51159 221 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 LONRF3Q496Y0 759 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 OTUD6AQ7L8S5 288 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 SMRP1Q8NCR6 262 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 MICAL1Q8TDZ2 1067 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 TCF25Q9BQ70 676 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 TLE6Q9H808 572 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 ENTPD7Q9NQZ7 604 aa23.57■■□□□ 1.36
SCARB1-210ENST00000545493 FAM86C2PA6NEL3 165 aa23.56■■□□□ 1.36
SCARB1-210ENST00000545493 HIDE1A8MVS5 230 aa23.56■■□□□ 1.36
SCARB1-210ENST00000545493 SRGAP2CP0DJJ0 459 aa23.56■■□□□ 1.36
SCARB1-210ENST00000545493 COASYQ13057 564 aa23.56■■□□□ 1.36
SCARB1-210ENST00000545493 SRGAP1Q7Z6B7 1085 aa23.56■■□□□ 1.36
SCARB1-210ENST00000545493 TMEM173Q86WV6 379 aaPredicted RBP23.56■■□□□ 1.36
SCARB1-210ENST00000545493 RNF149Q8NC42 400 aa23.56■■□□□ 1.36
SCARB1-210ENST00000545493 TCP11Q8WWU5 503 aa23.56■■□□□ 1.36
SCARB1-210ENST00000545493 C8orf76Q96K31 380 aa23.56■■□□□ 1.36
SCARB1-210ENST00000545493 LLPHQ9BRT6 129 aaKnown RBP23.56■■□□□ 1.36
SCARB1-210ENST00000545493 ZNF623O75123 536 aa23.55■■□□□ 1.36
SCARB1-210ENST00000545493 HOXA11P31270 313 aaPredicted RBP23.55■■□□□ 1.36
SCARB1-210ENST00000545493 UBXN11Q5T124 520 aa23.55■■□□□ 1.36
SCARB1-210ENST00000545493 PDE12Q6L8Q7 609 aaKnown RBP23.55■■□□□ 1.36
SCARB1-210ENST00000545493 ASAP3Q8TDY4 903 aa23.55■■□□□ 1.36
SCARB1-210ENST00000545493 CDCA3Q99618 268 aaPredicted RBP23.55■■□□□ 1.36
SCARB1-210ENST00000545493 LRFN3Q9BTN0 628 aa23.55■■□□□ 1.36
SCARB1-210ENST00000545493 TBC1D13Q9NVG8 400 aa23.55■■□□□ 1.36
SCARB1-210ENST00000545493 SPG21Q9NZD8 308 aa23.55■■□□□ 1.36
SCARB1-210ENST00000545493 TRIOO75962 3097 aa23.55■■□□□ 1.36
SCARB1-210ENST00000545493 NT5C1B-RDH14C9J2C7 533 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 B4GALT3O60512 393 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 ZC3H11AO75152 810 aaKnown RBP eCLIP23.54■■□□□ 1.36
SCARB1-210ENST00000545493 SKIP12755 728 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 ATP2B1P20020 1258 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 MCM7P33993 719 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 RARRES1P49788 294 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 BCAR1P56945 870 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 KCNC3Q14003 757 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 SAFBQ15424 915 aaKnown RBP eCLIP23.54■■□□□ 1.36
SCARB1-210ENST00000545493 RSPH1Q8WYR4 309 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 ANKEF1Q9NU02 776 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 INPP5FQ9Y2H2 1132 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 PCDHB2Q9Y5E7 798 aa23.54■■□□□ 1.36
SCARB1-210ENST00000545493 DGAT1O75907 488 aa23.53■■□□□ 1.36
SCARB1-210ENST00000545493 CAPSQ13938 189 aa23.53■■□□□ 1.36
SCARB1-210ENST00000545493 TMEM31Q5JXX7 168 aa23.53■■□□□ 1.36
SCARB1-210ENST00000545493 GLB1LQ6UWU2 654 aa23.53■■□□□ 1.36
SCARB1-210ENST00000545493 AGMOQ6ZNB7 445 aa23.53■■□□□ 1.36
SCARB1-210ENST00000545493 BCL7CQ8WUZ0 217 aaPredicted RBP23.53■■□□□ 1.36
SCARB1-210ENST00000545493 NGRNQ9NPE2 291 aaKnown RBP23.53■■□□□ 1.36
SCARB1-210ENST00000545493 PUF60Q9UHX1 559 aaKnown RBP23.53■■□□□ 1.36
SCARB1-210ENST00000545493 FSD2A1L4K1 749 aa23.52■■□□□ 1.36
SCARB1-210ENST00000545493 ASAP2O43150 1006 aa23.52■■□□□ 1.36
SCARB1-210ENST00000545493 TSPAN1O60635 241 aa23.52■■□□□ 1.36
SCARB1-210ENST00000545493 OFD1O75665 1012 aa23.52■■□□□ 1.36
SCARB1-210ENST00000545493 SPATA31C1P0DKV0 1188 aa23.52■■□□□ 1.36
SCARB1-210ENST00000545493 PTENP60484 403 aa23.52■■□□□ 1.36
SCARB1-210ENST00000545493 HMGN5P82970 282 aaKnown RBP23.52■■□□□ 1.36
SCARB1-210ENST00000545493 NOMO2Q5JPE7 1267 aa23.52■■□□□ 1.36
SCARB1-210ENST00000545493 FBXO18Q8NFZ0 1043 aa23.52■■□□□ 1.36
SCARB1-210ENST00000545493 PIGOQ8TEQ8 1089 aa23.52■■□□□ 1.36
SCARB1-210ENST00000545493 ZSCAN31Q96LW9 406 aaPredicted RBP23.52■■□□□ 1.36
SCARB1-210ENST00000545493 FOXP1Q9H334 677 aaPredicted RBP23.52■■□□□ 1.36
SCARB1-210ENST00000545493 NRDE2Q9H7Z3 1164 aa23.52■■□□□ 1.36
SCARB1-210ENST00000545493 SH2B1Q9NRF2 756 aaPredicted RBP23.52■■□□□ 1.36
SCARB1-210ENST00000545493 USP15Q9Y4E8 981 aaPredicted RBP23.52■■□□□ 1.36
SCARB1-210ENST00000545493 A0A087WWV3 80 aa23.51■■□□□ 1.35
SCARB1-210ENST00000545493 GPR37L1O60883 481 aa23.51■■□□□ 1.35
SCARB1-210ENST00000545493 MED24O75448 989 aa23.51■■□□□ 1.35
SCARB1-210ENST00000545493 ARL2P36404 184 aa23.51■■□□□ 1.35
SCARB1-210ENST00000545493 RBM25P49756 843 aaKnown RBP23.51■■□□□ 1.35
SCARB1-210ENST00000545493 AFF1P51825 1210 aaKnown RBP23.51■■□□□ 1.35
SCARB1-210ENST00000545493 KRT17Q04695 432 aa23.51■■□□□ 1.35
SCARB1-210ENST00000545493 MBTD1Q05BQ5 628 aa23.51■■□□□ 1.35
SCARB1-210ENST00000545493 MRPL10Q7Z7H8 261 aaKnown RBP23.51■■□□□ 1.35
SCARB1-210ENST00000545493 IFNLR1Q8IU57 520 aaPredicted RBP23.51■■□□□ 1.35
SCARB1-210ENST00000545493 POP1Q99575 1024 aaKnown RBP23.51■■□□□ 1.35
SCARB1-210ENST00000545493 ZBP1Q9H171 429 aa23.51■■□□□ 1.35
SCARB1-210ENST00000545493 USO1O60763 962 aaKnown RBP23.5■■□□□ 1.35
SCARB1-210ENST00000545493 OR52Z1P0C646 297 aa23.5■■□□□ 1.35
SCARB1-210ENST00000545493 GLRA2P23416 452 aa23.5■■□□□ 1.35
SCARB1-210ENST00000545493 MXD4Q14582 209 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms