RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 LONRF3Q496Y0 759 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 PRR16Q569H4 304 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 CYP26C1Q6V0L0 522 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 RIN2Q8WYP3 895 aaPredicted RBP16.46■□□□□ 0.23
COPS7A-220ENST00000544725 NXPE3Q969Y0 559 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 VN1R3Q9BXE9 311 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 INO80BQ9C086 356 aaPredicted RBP16.46■□□□□ 0.23
COPS7A-220ENST00000544725 DISC1Q9NRI5 854 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 MRPL17Q9NRX2 175 aaKnown RBP16.46■□□□□ 0.23
COPS7A-220ENST00000544725 FAM105AQ9NUU6 356 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 DNAJB4Q9UDY4 337 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 DPP7Q9UHL4 492 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 PIN4Q9Y237 131 aaKnown RBP16.46■□□□□ 0.23
COPS7A-220ENST00000544725 OTOGLQ3ZCN5 2332 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 ZBTB43O43298 467 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 OFD1O75665 1012 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 SSBP05455 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
COPS7A-220ENST00000544725 CREB3L3Q68CJ9 461 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 EXOC6Q8TAG9 804 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 URGCPQ8TCY9 931 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 RUBCNQ92622 972 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 PGBD4Q96DM1 585 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 RHOBTB2Q9BYZ6 727 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 LSG1Q9H089 658 aaKnown RBP16.45■□□□□ 0.22
COPS7A-220ENST00000544725 TBC1D17Q9HA65 648 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 WDR6Q9NNW5 1121 aaKnown RBP16.45■□□□□ 0.22
COPS7A-220ENST00000544725 CA14Q9ULX7 337 aa16.45■□□□□ 0.22
COPS7A-220ENST00000544725 A0A087WZ62 844 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 LILRB3O75022 631 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 N4BP1O75113 896 aaKnown RBP16.44■□□□□ 0.22
COPS7A-220ENST00000544725 ZNF623O75123 536 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 SRFP11831 508 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 DNM2P50570 870 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 PHLDB3Q6NSJ2 640 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 REXO1Q8N1G1 1221 aaKnown RBP16.44■□□□□ 0.22
COPS7A-220ENST00000544725 SLC44A3Q8N4M1 653 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 RSAD2Q8WXG1 361 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 FDXACB1Q9BRP7 624 aaPredicted RBP16.44■□□□□ 0.22
COPS7A-220ENST00000544725 C6orf50Q9HD87 102 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 MAN1C1Q9NR34 630 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 DLL3Q9NYJ7 618 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 EPS15L1Q9UBC2 864 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 SSX2IPQ9Y2D8 614 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 CLUHO75153 1309 aa16.44■□□□□ 0.22
COPS7A-220ENST00000544725 CCDC195A0A1B0GUA6 201 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 ESYT2A0FGR8 921 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 MEIS3P2A8K0S8 358 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 ALDH2P05091 517 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 URODP06132 367 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 ADH1AP07327 375 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 SP9P0CG40 484 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 SFNP31947 248 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 CIITAP33076 1130 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 JAK3P52333 1124 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 DRP2Q13474 957 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 TARBP2Q15633 366 aaKnown RBP16.43■□□□□ 0.22
COPS7A-220ENST00000544725 PFKFB3Q16875 520 aaPredicted RBP16.43■□□□□ 0.22
COPS7A-220ENST00000544725 SPECC1Q5M775 1068 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 ZNF410Q86VK4 478 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 ZNF280BQ86YH2 543 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 CCDC12Q8WUD4 166 aaPredicted RBP16.43■□□□□ 0.22
COPS7A-220ENST00000544725 FAM193BQ96PV7 902 aaPredicted RBP16.43■□□□□ 0.22
COPS7A-220ENST00000544725 TMEM175Q9BSA9 504 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 KANSL3Q9P2N6 904 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 FAN1Q9Y2M0 1017 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 SIT1Q9Y3P8 196 aa16.43■□□□□ 0.22
COPS7A-220ENST00000544725 TPRP12270 2363 aaKnown RBP16.43■□□□□ 0.22
COPS7A-220ENST00000544725 C2CD2LO14523 706 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 SOD2P04179 222 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 DCNP07585 359 aaKnown RBP16.42■□□□□ 0.22
COPS7A-220ENST00000544725 AK2P54819 239 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 NECTIN1Q15223 517 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 UGCGQ16739 394 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 MTERF2Q49AM1 385 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 CATSPER4Q7RTX7 472 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 C1orf210Q8IVY1 113 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 LENG9Q96B70 501 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 RPS6KC1Q96S38 1066 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 RIT2Q99578 217 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 ZMYND12Q9H0C1 365 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 ARHGEF3Q9NR81 526 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 SEPT9Q9UHD8 586 aaPredicted RBP16.42■□□□□ 0.22
COPS7A-220ENST00000544725 BRPF3Q9ULD4 1205 aa16.42■□□□□ 0.22
COPS7A-220ENST00000544725 IGKV6-21A0A0C4DH24 114 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 INPPL1O15357 1258 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 CHMP2AO43633 222 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 B4GALT3O60512 393 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 GAS7O60861 476 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 DDHD2O94830 711 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 GLUD1P00367 558 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 GNA11P29992 359 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 XKR3Q5GH77 459 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 GPR152Q8TDT2 470 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 SMG7Q92540 1137 aaKnown RBP16.41■□□□□ 0.22
COPS7A-220ENST00000544725 MYADMQ96S97 322 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 HERC2P3Q9BVR0 1158 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 TEKT3Q9BXF9 490 aa16.41■□□□□ 0.22
COPS7A-220ENST00000544725 NIFKQ9BYG3 293 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms