RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 MCL1Q07820 350 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 MTMR1Q13613 665 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 GORABQ5T7V8 394 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 MFSD14CQ5VZR4 134 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 USP53Q70EK8 1073 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.34□□□□□ -1.23
CPSF7-222ENST00000544585 PLEKHH3Q7Z736 793 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 SPATS2Q86XZ4 545 aaKnown RBP7.34□□□□□ -1.23
CPSF7-222ENST00000544585 TMEM145Q8NBT3 493 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 MAFAQ8NHW3 353 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-222ENST00000544585 SMAD5Q99717 465 aaKnown RBP7.34□□□□□ -1.23
CPSF7-222ENST00000544585 DSCC1Q9BVC3 393 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 DHX36Q9H2U1 1008 aaKnown RBP7.34□□□□□ -1.23
CPSF7-222ENST00000544585 CYP26B1Q9NR63 512 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 PI4KBQ9UBF8 816 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 RBPJLQ9UBG7 517 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 PTPRCP08575 1304 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 PDS5AQ29RF7 1337 aaKnown RBP7.33□□□□□ -1.24
CPSF7-222ENST00000544585 TMEM265A0A087WTH1 108 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 TCRBV16S1A1N1A0A5B0 115 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 KRBA1A5PL33 1030 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 AQP7O14520 342 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 SART1O43290 800 aaKnown RBP7.33□□□□□ -1.24
CPSF7-222ENST00000544585 ASNSP08243 561 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 SLURP2P0DP57 97 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 NAT1P18440 290 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 ITIH2P19823 946 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 RAB6AP20340 208 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 CCND3P30281 292 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-222ENST00000544585 PHKA1P46020 1223 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 SCNN1BP51168 640 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 NEK2P51955 445 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 RHBDL3P58872 404 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 HERVK_113P62684 666 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 SART3Q15020 963 aaKnown RBP7.33□□□□□ -1.24
CPSF7-222ENST00000544585 SEPT7Q16181 437 aaKnown RBP7.33□□□□□ -1.24
CPSF7-222ENST00000544585 NTRK3Q16288 839 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 CDCA2Q69YH5 1023 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-222ENST00000544585 LHFPL2Q6ZUX7 228 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 GPR142Q7Z601 462 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 ARRDC4Q8NCT1 418 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 OR2W6PQ8NHA6 318 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 LPAR1Q92633 364 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 IRF7Q92985 503 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 PRDM14Q9GZV8 571 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 PUS7LQ9H0K6 701 aaKnown RBP7.33□□□□□ -1.24
CPSF7-222ENST00000544585 IFT22Q9H7X7 185 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 PRR13Q9NZ81 148 aa7.33□□□□□ -1.24
CPSF7-222ENST00000544585 GPR55Q9Y2T6 319 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-222ENST00000544585 MROH7-TTC4A0A0A0MT08 1334 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 LOC102724159A0A0B4J2E5 919 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 DNM1LO00429 736 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 SCG5P05408 212 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 CYP7A1P22680 504 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 RAB27AP51159 221 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 TIMM10P62072 90 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 TMPRSS15P98073 1019 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 MECOMQ03112 1051 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 PWP2Q15269 919 aaKnown RBP7.32□□□□□ -1.24
CPSF7-222ENST00000544585 SHHQ15465 462 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 PIK3R6Q5UE93 754 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 PI4K2BQ8TCG2 481 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 DCAF4Q8WV16 495 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 YIPF2Q9BWQ6 316 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 ACSS3Q9H6R3 686 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 GFOD1Q9NXC2 390 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 DDX20Q9UHI6 824 aaKnown RBP7.32□□□□□ -1.24
CPSF7-222ENST00000544585 RABGAP1Q9Y3P9 1069 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 TRAF6Q9Y4K3 522 aa7.32□□□□□ -1.24
CPSF7-222ENST00000544585 SLC15A5A6NIM6 579 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 STRNO43815 780 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 GAS2O43903 313 aaKnown RBP7.31□□□□□ -1.24
CPSF7-222ENST00000544585 ZEB2O60315 1214 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 SLITRK5O94991 958 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 CRTAMO95727 393 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 BAG3O95817 575 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 CELA2BP08218 269 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-222ENST00000544585 PYGMP11217 842 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 RTP1P59025 263 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 MVPQ14764 893 aaKnown RBP7.31□□□□□ -1.24
CPSF7-222ENST00000544585 CCL14Q16627 93 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 PRSS53Q2L4Q9 553 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 CCDC184Q52MB2 194 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 SLC35F1Q5T1Q4 408 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 CCSAPQ6IQ19 270 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-222ENST00000544585 ZCCHC8Q6NZY4 707 aaKnown RBP7.31□□□□□ -1.24
CPSF7-222ENST00000544585 SLC39A5Q6ZMH5 540 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 DDX53Q86TM3 631 aaKnown RBP7.31□□□□□ -1.24
CPSF7-222ENST00000544585 EXOC8Q8IYI6 725 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 CHPFQ8IZ52 775 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 AGGF1Q8N302 714 aaeCLIP7.31□□□□□ -1.24
CPSF7-222ENST00000544585 MORC4Q8TE76 937 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 SNX27Q96L92 541 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 NOL10Q9BSC4 688 aaKnown RBP7.31□□□□□ -1.24
CPSF7-222ENST00000544585 SIL1Q9H173 461 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 TXNRD2Q9NNW7 524 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 AASDHPPTQ9NRN7 309 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 ZIM2Q9NZV7 527 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-222ENST00000544585 TPX2Q9ULW0 747 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms