RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 CDCA2Q69YH5 1023 aaPredicted RBP15.05■□□□□ -0
SP140-213ENST00000543928 CNKSR3Q6P9H4 555 aa15.05■□□□□ -0
SP140-213ENST00000543928 PSRC1Q6PGN9 363 aaPredicted RBP15.05■□□□□ -0
SP140-213ENST00000543928 ZNF365Q70YC5 407 aa15.05■□□□□ -0
SP140-213ENST00000543928 IFNLR1Q8IU57 520 aaPredicted RBP15.05■□□□□ -0
SP140-213ENST00000543928 MYCT1Q8N699 235 aa15.05■□□□□ -0
SP140-213ENST00000543928 C7orf25Q9BPX7 421 aa15.05■□□□□ -0
SP140-213ENST00000543928 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.05■□□□□ -0
SP140-213ENST00000543928 KIFC3Q9BVG8 833 aa15.05■□□□□ -0
SP140-213ENST00000543928 NFKBIZQ9BYH8 718 aa15.05■□□□□ -0
SP140-213ENST00000543928 INO80BQ9C086 356 aaPredicted RBP15.05■□□□□ -0
SP140-213ENST00000543928 UBE2OQ9C0C9 1292 aaKnown RBP15.05■□□□□ -0
SP140-213ENST00000543928 BLZF1Q9H2G9 400 aa15.05■□□□□ -0
SP140-213ENST00000543928 LARSQ9P2J5 1176 aaKnown RBP15.05■□□□□ -0
SP140-213ENST00000543928 ST3GAL5Q9UNP4 418 aa15.05■□□□□ -0
SP140-213ENST00000543928 ADGRA3Q8IWK6 1321 aa15.04■□□□□ -0
SP140-213ENST00000543928 FGBP02675 491 aa15.04■□□□□ -0
SP140-213ENST00000543928 ACTN1P12814 892 aa15.04■□□□□ -0
SP140-213ENST00000543928 SFPQP23246 707 aaKnown RBP eCLIP15.04■□□□□ -0
SP140-213ENST00000543928 ASIC1P78348 528 aa15.04■□□□□ -0
SP140-213ENST00000543928 MBTD1Q05BQ5 628 aa15.04■□□□□ -0
SP140-213ENST00000543928 CUL4BQ13620 913 aa15.04■□□□□ -0
SP140-213ENST00000543928 ODR4Q5SWX8 454 aa15.04■□□□□ -0
SP140-213ENST00000543928 CNNM4Q6P4Q7 775 aa15.04■□□□□ -0
SP140-213ENST00000543928 OTOP2Q7RTS6 562 aa15.04■□□□□ -0
SP140-213ENST00000543928 CATSPER4Q7RTX7 472 aa15.04■□□□□ -0
SP140-213ENST00000543928 ZBTB8OSQ8IWT0 167 aa15.04■□□□□ -0
SP140-213ENST00000543928 SPIRE2Q8WWL2 714 aa15.04■□□□□ -0
SP140-213ENST00000543928 APBB2Q92870 758 aa15.04■□□□□ -0
SP140-213ENST00000543928 C2orf40Q9H1Z8 148 aa15.04■□□□□ -0
SP140-213ENST00000543928 ERVK-5Q9HDB9 667 aa15.04■□□□□ -0
SP140-213ENST00000543928 KMT5AQ9NQR1 393 aa15.04■□□□□ -0
SP140-213ENST00000543928 LMBRD1Q9NUN5 540 aa15.04■□□□□ -0
SP140-213ENST00000543928 KCNG1Q9UIX4 513 aa15.04■□□□□ -0
SP140-213ENST00000543928 FRMD3A2A2Y4 597 aa15.03■□□□□ -0
SP140-213ENST00000543928 SLC16A4O15374 487 aa15.03■□□□□ -0
SP140-213ENST00000543928 GTPBP6O43824 516 aaPredicted RBP15.03■□□□□ -0
SP140-213ENST00000543928 TRAK2O60296 914 aa15.03■□□□□ -0
SP140-213ENST00000543928 GAP43P17677 238 aa15.03■□□□□ -0
SP140-213ENST00000543928 SMTNP53814 917 aa15.03■□□□□ -0
SP140-213ENST00000543928 IKBKEQ14164 716 aa15.03■□□□□ -0
SP140-213ENST00000543928 KANK3Q6NY19 840 aa15.03■□□□□ -0
SP140-213ENST00000543928 CHRDL2Q6WN34 429 aa15.03■□□□□ -0
SP140-213ENST00000543928 SFR1Q86XK3 245 aa15.03■□□□□ -0
SP140-213ENST00000543928 CCDC65Q8IXS2 484 aa15.03■□□□□ -0
SP140-213ENST00000543928 CCDC34Q96HJ3 373 aa15.03■□□□□ -0
SP140-213ENST00000543928 NTPCRQ9BSD7 190 aaKnown RBP15.03■□□□□ -0
SP140-213ENST00000543928 TMX1Q9H3N1 280 aa15.03■□□□□ -0
SP140-213ENST00000543928 PANK4Q9NVE7 773 aa15.03■□□□□ -0
SP140-213ENST00000543928 ARHGAP28Q9P2N2 729 aa15.03■□□□□ -0
SP140-213ENST00000543928 KINO60870 393 aaKnown RBP15.02■□□□□ -0
SP140-213ENST00000543928 ERLIN2O94905 339 aa15.02■□□□□ -0
SP140-213ENST00000543928 MYL1P05976 194 aa15.02■□□□□ -0
SP140-213ENST00000543928 PRR29P0C7W0 189 aa15.02■□□□□ -0
SP140-213ENST00000543928 BMP8BP34820 402 aa15.02■□□□□ -0
SP140-213ENST00000543928 EFNA5P52803 228 aa15.02■□□□□ -0
SP140-213ENST00000543928 HERC4Q5GLZ8 1057 aaPredicted RBP15.02■□□□□ -0
SP140-213ENST00000543928 C9orf50Q5SZB4 431 aa15.02■□□□□ -0
SP140-213ENST00000543928 FAM178BQ8IXR5 827 aa15.02■□□□□ -0
SP140-213ENST00000543928 HERVK_113Q902F9 699 aa15.02■□□□□ -0
SP140-213ENST00000543928 TIGD1Q96MW7 591 aa15.02■□□□□ -0
SP140-213ENST00000543928 CCDC113Q9H0I3 377 aa15.02■□□□□ -0
SP140-213ENST00000543928 DACT1Q9NYF0 836 aa15.02■□□□□ -0
SP140-213ENST00000543928 ABHD14A-ACY1A0A1B0GW23 586 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 ZBBXA8MT70 800 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 K7ENM7 598 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 K7ERI5 159 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 MGEA5O60502 916 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 TSPAN1O60635 241 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 BAIAP3O94812 1187 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 PRKCBP05771 671 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 NMT1P30419 496 aaKnown RBP15.01□□□□□ -0.01
SP140-213ENST00000543928 NCKAP1LP55160 1127 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 COASYQ13057 564 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 POSTNQ15063 836 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 PCBP1Q15365 356 aaKnown RBP eCLIP15.01□□□□□ -0.01
SP140-213ENST00000543928 SHHQ15465 462 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 MAPK6Q16659 721 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 AMHR2Q16671 573 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 PRPF38BQ5VTL8 546 aaKnown RBP15.01□□□□□ -0.01
SP140-213ENST00000543928 UNC13DQ70J99 1090 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 HAUS6Q7Z4H7 955 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 TMEM161BQ8NDZ6 487 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 FIZ1Q96SL8 496 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 FTHL17Q9BXU8 183 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 FZD8Q9H461 694 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 TMEM134Q9H6X4 195 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 AGPAT5Q9NUQ2 364 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 PRMT7Q9NVM4 692 aaPredicted RBP15.01□□□□□ -0.01
SP140-213ENST00000543928 TBC1D7Q9P0N9 293 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 SEL1LQ9UBV2 794 aa15.01□□□□□ -0.01
SP140-213ENST00000543928 PIN4Q9Y237 131 aaKnown RBP15.01□□□□□ -0.01
SP140-213ENST00000543928 PHLPP2Q6ZVD8 1323 aa15□□□□□ -0.01
SP140-213ENST00000543928 PVALEFA0A1B0GWK0 134 aa15□□□□□ -0.01
SP140-213ENST00000543928 DENND3A2RUS2 1198 aa15□□□□□ -0.01
SP140-213ENST00000543928 H0YCG3 227 aa15□□□□□ -0.01
SP140-213ENST00000543928 B4GALT5O43286 388 aa15□□□□□ -0.01
SP140-213ENST00000543928 EFCAB14O75071 495 aa15□□□□□ -0.01
SP140-213ENST00000543928 MAPTP10636 758 aaKnown RBP15□□□□□ -0.01
SP140-213ENST00000543928 ZSCAN20P17040 1043 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms