RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	CSRP3	P50461	194 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	CLCN6	P51797	869 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	ADAM17	P78536	824 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	EXOSC10	Q01780	885 aa	Known RBP	7.33	□□□□□ -1.24
CIT-213	ENST00000543324	NONO	Q15233	471 aa	Known RBP eCLIP	7.33	□□□□□ -1.24
CIT-213	ENST00000543324	DGKD	Q16760	1214 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	HSDL1	Q3SXM5	330 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	BRDT	Q58F21	947 aa	Predicted RBP	7.33	□□□□□ -1.24
CIT-213	ENST00000543324	RARS2	Q5T160	578 aa	Known RBP	7.33	□□□□□ -1.24
CIT-213	ENST00000543324	PCNX4	Q63HM2	1172 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	KCNV1	Q6PIU1	500 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	APOA5	Q6Q788	366 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	SEPT14	Q6ZU15	432 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	TMTC3	Q6ZXV5	915 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	CATIP	Q7Z7H3	387 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	HOMER1	Q86YM7	354 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	TEX2	Q8IWB9	1127 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	FAM160A2	Q8N612	972 aa	Predicted RBP	7.33	□□□□□ -1.24
CIT-213	ENST00000543324	SHD	Q96IW2	340 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	KLHL5	Q96PQ7	755 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	C16orf70	Q9BSU1	422 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	VAT1L	Q9HCJ6	419 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	SLC2A4RG	Q9NR83	387 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	MTF2	Q9Y483	593 aa	Predicted RBP	7.33	□□□□□ -1.24
CIT-213	ENST00000543324	EVPL	Q92817	2033 aa		7.33	□□□□□ -1.24
CIT-213	ENST00000543324	SDK1	Q7Z5N4	2213 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	RSPH10B2	B2RC85	870 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	SPATA31C2	B4DYI2	1134 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	GCOM1	H8Y6P7	765 aa	Predicted RBP	7.32	□□□□□ -1.24
CIT-213	ENST00000543324	HR	O43593	1189 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	DHX16	O60231	1041 aa	Known RBP	7.32	□□□□□ -1.24
CIT-213	ENST00000543324	PPFIA3	O75145	1194 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	PPFIA4	O75335	1185 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	RSPH10B	P0C881	870 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	POLR2M	P0CAP2	368 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	ZNF286B	P0CG31	522 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	CAST	P20810	708 aa	Known RBP	7.32	□□□□□ -1.24
CIT-213	ENST00000543324	CCND2	P30279	289 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	KIF5B	P33176	963 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	RCAN1	P53805	252 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	CHMP4BP1	P59074	171 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	LAMC2	Q13753	1193 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	CCDC149	Q6ZUS6	474 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	CMTR2	Q8IYT2	770 aa	Known RBP	7.32	□□□□□ -1.24
CIT-213	ENST00000543324	RASEF	Q8IZ41	740 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	TMTC2	Q8N394	836 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	FBXL16	Q8N461	479 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	APBB2	Q92870	758 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	CLDN23	Q96B33	292 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	MYADM	Q96S97	322 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	LZTS2	Q9BRK4	669 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	OSBPL7	Q9BZF2	842 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	JADE2	Q9NQC1	790 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	MRVI1	Q9Y6F6	885 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	USP9Y	O00507	2555 aa	Predicted RBP	7.32	□□□□□ -1.24
CIT-213	ENST00000543324	PCNX1	Q96RV3	2341 aa		7.32	□□□□□ -1.24
CIT-213	ENST00000543324	ARID2	Q68CP9	1835 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	C2orf16	Q68DN1	1984 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	NAV3	Q8IVL0	2385 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324		A0A087WV48	116 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324		A0A1B0GTL3	188 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	HIDE1	A8MVS5	230 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	FIBP	O43427	364 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	GGPS1	O95749	300 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	CALM1	P0DP23	149 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	CALM2	P0DP24	149 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	CALM3	P0DP25	149 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	PSEN2	P49810	448 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	ZNF445	P59923	1031 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	MFSD10	Q14728	455 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	PTPN14	Q15678	1187 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	KIAA0753	Q2KHM9	967 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	ADCK5	Q3MIX3	580 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	7.31	□□□□□ -1.24
CIT-213	ENST00000543324	PLA2G2C	Q5R387	149 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	DAB2IP	Q5VWQ8	1189 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	PLPP4	Q5VZY2	271 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	TYW1B	Q6NUM6	668 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	USP17L6P	Q6QN14	398 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	CASC1	Q6TDU7	716 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	METTL7B	Q6UX53	244 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	SERINC5	Q86VE9	423 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	DHX37	Q8IY37	1157 aa	Known RBP	7.31	□□□□□ -1.24
CIT-213	ENST00000543324	C12orf76	Q8N812	135 aa	Predicted RBP	7.31	□□□□□ -1.24
CIT-213	ENST00000543324	CTCFL	Q8NI51	663 aa	Predicted RBP	7.31	□□□□□ -1.24
CIT-213	ENST00000543324	FEZF2	Q8TBJ5	459 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	MDM1	Q8TC05	714 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	NANOS1	Q8WY41	292 aa	Known RBP	7.31	□□□□□ -1.24
CIT-213	ENST00000543324	TNPO1	Q92973	898 aa	Known RBP	7.31	□□□□□ -1.24
CIT-213	ENST00000543324	RRP36	Q96EU6	259 aa	Known RBP	7.31	□□□□□ -1.24
CIT-213	ENST00000543324	PDLIM2	Q96JY6	352 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	SENP7	Q9BQF6	1050 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	KATNAL1	Q9BW62	490 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	AGXT2	Q9BYV1	514 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	ARRDC1-AS1	Q9H2J1	176 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	ANO2	Q9NQ90	1003 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	FAM217B	Q9NTX9	383 aa	Predicted RBP	7.31	□□□□□ -1.24
CIT-213	ENST00000543324	HDAC6	Q9UBN7	1215 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	TELO2	Q9Y4R8	837 aa		7.31	□□□□□ -1.24
CIT-213	ENST00000543324	PAXBP1	Q9Y5B6	917 aa		7.31	□□□□□ -1.24

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