RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 KRT83P78385 493 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
CDH4-201ENST00000543233 KIF5AQ12840 1032 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 MAP7Q14244 749 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 LRRC41Q15345 812 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 CREG2Q8IUH2 290 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 ANKRD27Q96NW4 1050 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 ZMYND12Q9H0C1 365 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 SH3GLB2Q9NR46 395 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 SUCLA2Q9P2R7 463 aaPredicted RBP12.14□□□□□ -0.47
CDH4-201ENST00000543233 MAGEC2Q9UBF1 373 aaPredicted RBP12.14□□□□□ -0.47
CDH4-201ENST00000543233 SERPINB13Q9UIV8 391 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 ATP8A1Q9Y2Q0 1164 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 USP17L10C9JJH3 530 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 M0R2N6 131 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 PSMA7O14818 248 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 DMPKQ09013 629 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 CFAP157Q5JU67 520 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 IRGCQ6NXR0 463 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 KRT25Q7Z3Z0 450 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 RETREG2Q8NC44 543 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 SNED1Q8TER0 1413 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 KCNN1Q92952 543 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 NSRP1Q9H0G5 558 aaKnown RBP12.14□□□□□ -0.47
CDH4-201ENST00000543233 ZHX3Q9H4I2 956 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 LRWD1Q9UFC0 647 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 SNX12Q9UMY4 172 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 RREB1Q92766 1687 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 BOLA2-SMG1P6H3BVE0 249 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 NCK2O43639 380 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 GDF11O95390 407 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 TRIM21P19474 475 aaKnown RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 SERPINB3P29508 390 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 MTIF2P46199 727 aaKnown RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 COPS2P61201 443 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 RASSF7Q02833 373 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 TRADDQ15628 312 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 CALCRLQ16602 461 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 USP17L6PQ6QN14 398 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 SLC15A3Q8IY34 581 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 RAB17Q9H0T7 212 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 LRRC42Q9Y546 428 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 TMEM110-MUSTN1A8MSY1 372 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 ATP9AO75110 1047 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 TACC1O75410 805 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 ADRA2BP18089 450 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDH4-201ENST00000543233 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 WDR75Q8IWA0 830 aaKnown RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 FAM133AQ8N9E0 248 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 ANKS1AQ92625 1134 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 MS4A14Q96JA4 679 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 ZMAT2Q96NC0 199 aaKnown RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 KRT12Q99456 494 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 SPZ1Q9BXG8 430 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 RNPEPL1Q9HAU8 725 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 ETNK1Q9HBU6 452 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 TLDC2A0PJX2 215 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 EIF3FO00303 357 aaPredicted RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 APBA3O96018 575 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 CALB2P22676 271 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 PTDSS1P48651 473 aaKnown RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 ADCY7P51828 1080 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 EMC10Q5UCC4 262 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 CDC42EP5Q6NZY7 148 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 COL23A1Q86Y22 540 aaPredicted RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 CD302Q8IX05 232 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 KLHL7Q8IXQ5 586 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 ADSSL1Q8N142 457 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 SDR16C5Q8N3Y7 309 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 MPHOSPH6Q99547 160 aaKnown RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 KCNMB3Q9NPA1 279 aa12.13□□□□□ -0.47
CDH4-201ENST00000543233 TDRKHQ9Y2W6 561 aaKnown RBP12.13□□□□□ -0.47
CDH4-201ENST00000543233 TTC26A0AVF1 554 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 ANO9A1A5B4 782 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 MAGEB3O15480 346 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 ACADSP16219 412 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 HSD17B3P37058 310 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 THOC7Q6I9Y2 204 aaKnown RBP12.12□□□□□ -0.47
CDH4-201ENST00000543233 ADGRF4Q8IZF3 695 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 GLIS3Q8NEA6 775 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 SNX29Q8TEQ0 813 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 CALML4Q96GE6 196 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 AGBL1Q96MI9 1066 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 CTTNBP2NLQ9P2B4 639 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 RASAL2Q9UJF2 1139 aa12.12□□□□□ -0.47
CDH4-201ENST00000543233 RCCD1A6NED2 376 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms