RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 NPTX2P47972 431 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 AMPD3Q01432 767 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 MBTD1Q05BQ5 628 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 DYMQ7RTS9 669 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 CATSPER4Q7RTX7 472 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 RTN4RL1Q86UN2 441 aaPredicted RBP18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 CEP57L1Q8IYX8 460 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 SPIRE2Q8WWL2 714 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 STAMQ92783 540 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 DNAJC19Q96DA6 116 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 NTPCRQ9BSD7 190 aaKnown RBP18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 LARSQ9P2J5 1176 aaKnown RBP18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 SERTAD1Q9UHV2 236 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 ADGRA3Q8IWK6 1321 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 CCDC169A6NNP5 214 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 ENPP3O14638 875 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 TBCAO75347 108 aaKnown RBP18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 KCNJ6P48051 423 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 EFNA5P52803 228 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 DSC3Q14574 896 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 LONRF3Q496Y0 759 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 LINC01599Q8WXQ3 324 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 TSPYL2Q9H2G4 693 aaPredicted RBP18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 PARVGQ9HBI0 331 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 KMT5AQ9NQR1 393 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 CHST12Q9NRB3 414 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 MICAL3Q7RTP6 2002 aa18.89■□□□□ 0.61
RABGGTA-203ENST00000543002 MGEA5O60502 916 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 ERLIN2O94905 339 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 ZSCAN20P17040 1043 aaPredicted RBP18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 SMTNP53814 917 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 CNNM4Q6P4Q7 775 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 PPP4R3CPQ6ZMV5 832 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 MYCT1Q8N699 235 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 PHOSPHO2Q8TCD6 241 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 SLC9A7Q96T83 725 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 ADAM2Q99965 735 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 C7orf25Q9BPX7 421 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 KIFC3Q9BVG8 833 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 TRIM9Q9C026 710 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 CCDC113Q9H0I3 377 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 FZD8Q9H461 694 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 RGS18Q9NS28 235 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 AGPAT5Q9NUQ2 364 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 ARHGAP28Q9P2N2 729 aa18.88■□□□□ 0.61
RABGGTA-203ENST00000543002 RANBP2P49792 3224 aaKnown RBP18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 DENND3A2RUS2 1198 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 SLC16A4O15374 487 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 TSPAN1O60635 241 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 ZNF202O95125 648 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 AMHP03971 560 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 DEFB103AP81534 67 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 MAPK6Q16659 721 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 AMHR2Q16671 573 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 FAM187BQ17R55 369 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 PRIMPOLQ96LW4 560 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 ZHX3Q9H4I2 956 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 TMEM134Q9H6X4 195 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 C1orf112Q9NSG2 853 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 PRMT7Q9NVM4 692 aaPredicted RBP18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 PIN4Q9Y237 131 aaKnown RBP18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 MYH11P35749 1972 aa18.87■□□□□ 0.61
RABGGTA-203ENST00000543002 PHLPP2Q6ZVD8 1323 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 FRMD3A2A2Y4 597 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 K7ERI5 159 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 TRAK2O60296 914 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 GADD45BO75293 160 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 IDEP14735 1019 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 ATP2A2P16615 1042 aaKnown RBP18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 GAP43P17677 238 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 AXLP30530 894 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 HOXA11P31270 313 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 AFMP43652 599 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 NCKAP1LP55160 1127 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 NCBP1Q09161 790 aaKnown RBP18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 LRIT3Q3SXY7 679 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 KRBA2Q6ZNG9 492 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 SLC24A5Q71RS6 500 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 FMR1NBQ8N0W7 255 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 ENGASEQ8NFI3 743 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 PAGE5Q96GU1 130 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 DACT1Q9NYF0 836 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 SEL1LQ9UBV2 794 aa18.86■□□□□ 0.61
RABGGTA-203ENST00000543002 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 C9IYK1 514 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 H0YCG3 227 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 ACKR2O00590 384 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 PRKCBP05771 671 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 SCP2P22307 547 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 SARSP49591 514 aaKnown RBP18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 FAM160A1Q05DH4 1040 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 SFR1Q86XK3 245 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 CCDC65Q8IXS2 484 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 MYOCDQ8IZQ8 938 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 TMEM161BQ8NDZ6 487 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 CNNM3Q8NE01 707 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 KCNN1Q92952 543 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms