RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 ZBP1Q9H171 429 aa29.11■■■□□ 2.25
PDCD2-209ENST00000542896 SLKQ9H2G2 1235 aaPredicted RBP29.11■■■□□ 2.25
PDCD2-209ENST00000542896 ZNF318Q5VUA4 2279 aa29.11■■■□□ 2.25
PDCD2-209ENST00000542896 PIEZO1Q92508 2521 aa29.1■■■□□ 2.25
PDCD2-209ENST00000542896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.1■■■□□ 2.25
PDCD2-209ENST00000542896 SLC37A4O43826 429 aa29.1■■■□□ 2.25
PDCD2-209ENST00000542896 NOMO2Q5JPE7 1267 aa29.1■■■□□ 2.25
PDCD2-209ENST00000542896 CYP26B1Q9NR63 512 aa29.1■■■□□ 2.25
PDCD2-209ENST00000542896 TBC1D13Q9NVG8 400 aa29.1■■■□□ 2.25
PDCD2-209ENST00000542896 KCNJ14Q9UNX9 436 aa29.1■■■□□ 2.25
PDCD2-209ENST00000542896 EML1O00423 815 aa29.09■■■□□ 2.25
PDCD2-209ENST00000542896 DKC1O60832 514 aaKnown RBP eCLIP29.09■■■□□ 2.25
PDCD2-209ENST00000542896 QARSP47897 775 aaKnown RBP29.09■■■□□ 2.25
PDCD2-209ENST00000542896 RNASELQ05823 741 aaKnown RBP29.09■■■□□ 2.25
PDCD2-209ENST00000542896 TMEM173Q86WV6 379 aaPredicted RBP29.09■■■□□ 2.25
PDCD2-209ENST00000542896 AUTS2Q8WXX7 1259 aa29.09■■■□□ 2.25
PDCD2-209ENST00000542896 IGSF21Q96ID5 467 aa29.09■■■□□ 2.25
PDCD2-209ENST00000542896 TM6SF1Q9BZW5 370 aa29.09■■■□□ 2.25
PDCD2-209ENST00000542896 POMKQ9H5K3 350 aa29.09■■■□□ 2.25
PDCD2-209ENST00000542896 NRDE2Q9H7Z3 1164 aa29.09■■■□□ 2.25
PDCD2-209ENST00000542896 WDR81Q562E7 1941 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 CCDC194A0A1B0GVG4 234 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 ZNF623O75123 536 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 MTHFRP42898 656 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 POLGP54098 1239 aaPredicted RBP29.08■■■□□ 2.25
PDCD2-209ENST00000542896 GIT2Q14161 759 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 DDX53Q86TM3 631 aaKnown RBP29.08■■■□□ 2.25
PDCD2-209ENST00000542896 SLC7A3Q8WY07 619 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 PGBD4Q96DM1 585 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 RIPOR3Q96MK2 946 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 GBP3Q9H0R5 595 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 PDRG1Q9NUG6 133 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 COL4A3BPQ9Y5P4 624 aa29.08■■■□□ 2.25
PDCD2-209ENST00000542896 MEIS3P2A8K0S8 358 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 OFD1O75665 1012 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 GALTP07902 379 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 CTSAP10619 480 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 NPEPPSP55786 919 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 PPP2R5CQ13362 524 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 RARS2Q5T160 578 aaKnown RBP29.07■■■□□ 2.24
PDCD2-209ENST00000542896 KREMEN2Q8NCW0 462 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 CEP170P1Q96L14 293 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 FAM20AQ96MK3 541 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 DZANK1Q9NVP4 752 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 VAV3Q9UKW4 847 aa29.07■■■□□ 2.24
PDCD2-209ENST00000542896 C2CD4DB7Z1M9 353 aa29.06■■■□□ 2.24
PDCD2-209ENST00000542896 CDKL5O76039 1030 aa29.06■■■□□ 2.24
PDCD2-209ENST00000542896 NEK8Q86SG6 692 aa29.06■■■□□ 2.24
PDCD2-209ENST00000542896 EXOC8Q8IYI6 725 aa29.06■■■□□ 2.24
PDCD2-209ENST00000542896 PHOX2BQ99453 314 aa29.06■■■□□ 2.24
PDCD2-209ENST00000542896 PHF20Q9BVI0 1012 aa29.06■■■□□ 2.24
PDCD2-209ENST00000542896 IFT122Q9HBG6 1241 aa29.06■■■□□ 2.24
PDCD2-209ENST00000542896 KCNMB3Q9NPA1 279 aa29.06■■■□□ 2.24
PDCD2-209ENST00000542896 AGPAT5Q9NUQ2 364 aa29.06■■■□□ 2.24
PDCD2-209ENST00000542896 IRAK3Q9Y616 596 aa29.06■■■□□ 2.24
PDCD2-209ENST00000542896 MARCH6O60337 910 aa29.05■■■□□ 2.24
PDCD2-209ENST00000542896 P4HBP07237 508 aaKnown RBP29.05■■■□□ 2.24
PDCD2-209ENST00000542896 WEE2P0C1S8 567 aa29.05■■■□□ 2.24
PDCD2-209ENST00000542896 GCFC2P16383 781 aaKnown RBP29.05■■■□□ 2.24
PDCD2-209ENST00000542896 XBP1P17861 261 aa29.05■■■□□ 2.24
PDCD2-209ENST00000542896 VCPP55072 806 aaKnown RBP29.05■■■□□ 2.24
PDCD2-209ENST00000542896 C12orf76Q8N812 135 aaPredicted RBP29.05■■■□□ 2.24
PDCD2-209ENST00000542896 URGCPQ8TCY9 931 aa29.05■■■□□ 2.24
PDCD2-209ENST00000542896 BCL7CQ8WUZ0 217 aaPredicted RBP29.05■■■□□ 2.24
PDCD2-209ENST00000542896 DNAJB4Q9UDY4 337 aa29.05■■■□□ 2.24
PDCD2-209ENST00000542896 PPME1Q9Y570 386 aa29.05■■■□□ 2.24
PDCD2-209ENST00000542896 PCDHB2Q9Y5E7 798 aa29.05■■■□□ 2.24
PDCD2-209ENST00000542896 EPCAMP16422 314 aa29.04■■■□□ 2.24
PDCD2-209ENST00000542896 AVPR2P30518 371 aa29.04■■■□□ 2.24
PDCD2-209ENST00000542896 SLC11A1P49279 550 aa29.04■■■□□ 2.24
PDCD2-209ENST00000542896 TCF15Q12870 199 aa29.04■■■□□ 2.24
PDCD2-209ENST00000542896 MTMR3Q13615 1198 aa29.04■■■□□ 2.24
PDCD2-209ENST00000542896 ATAT1Q5SQI0 421 aa29.04■■■□□ 2.24
PDCD2-209ENST00000542896 PPP4R3AQ6IN85 833 aa29.04■■■□□ 2.24
PDCD2-209ENST00000542896 SRGAP1Q7Z6B7 1085 aa29.04■■■□□ 2.24
PDCD2-209ENST00000542896 ZNF579Q8NAF0 562 aaKnown RBP29.04■■■□□ 2.24
PDCD2-209ENST00000542896 PSPC1Q8WXF1 523 aaKnown RBP29.04■■■□□ 2.24
PDCD2-209ENST00000542896 TMEM143Q96AN5 459 aa29.04■■■□□ 2.24
PDCD2-209ENST00000542896 SORCS3Q9UPU3 1222 aa29.04■■■□□ 2.24
PDCD2-209ENST00000542896 CCNT1O60563 726 aaKnown RBP29.03■■■□□ 2.24
PDCD2-209ENST00000542896 SRGAP2CP0DJJ0 459 aa29.03■■■□□ 2.24
PDCD2-209ENST00000542896 RFC5P40937 340 aa29.03■■■□□ 2.24
PDCD2-209ENST00000542896 PRPF31Q8WWY3 499 aaKnown RBP29.03■■■□□ 2.24
PDCD2-209ENST00000542896 NAP1L4Q99733 375 aaKnown RBP29.03■■■□□ 2.24
PDCD2-209ENST00000542896 DHX33Q9H6R0 707 aaKnown RBP29.03■■■□□ 2.24
PDCD2-209ENST00000542896 BMP2KQ9NSY1 1161 aaPredicted RBP29.03■■■□□ 2.24
PDCD2-209ENST00000542896 WRAP73Q9P2S5 460 aaPredicted RBP29.03■■■□□ 2.24
PDCD2-209ENST00000542896 DBR1Q9UK59 544 aaKnown RBP29.03■■■□□ 2.24
PDCD2-209ENST00000542896 SCRN1Q12765 414 aa29.02■■■□□ 2.24
PDCD2-209ENST00000542896 EPHA7Q15375 998 aa29.02■■■□□ 2.24
PDCD2-209ENST00000542896 KIAA1841Q6NSI8 718 aa29.02■■■□□ 2.24
PDCD2-209ENST00000542896 KANK3Q6NY19 840 aa29.02■■■□□ 2.24
PDCD2-209ENST00000542896 AGMOQ6ZNB7 445 aa29.02■■■□□ 2.24
PDCD2-209ENST00000542896 PIK3AP1Q6ZUJ8 805 aa29.02■■■□□ 2.24
PDCD2-209ENST00000542896 ZNF280BQ86YH2 543 aa29.02■■■□□ 2.24
PDCD2-209ENST00000542896 UBALD2Q8IYN6 164 aa29.02■■■□□ 2.24
PDCD2-209ENST00000542896 TDRD5Q8NAT2 981 aaKnown RBP29.02■■■□□ 2.24
PDCD2-209ENST00000542896 SLC22A17Q8WUG5 538 aa29.02■■■□□ 2.24
PDCD2-209ENST00000542896 FAM193BQ96PV7 902 aaPredicted RBP29.02■■■□□ 2.24
PDCD2-209ENST00000542896 LXNQ9BS40 222 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms