RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 SLC8A2Q9UPR5 921 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 APOBEC2Q9Y235 224 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 PIAS3Q9Y6X2 628 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 UBR5O95071 2799 aaPredicted RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 LOXHD1Q8IVV2 1947 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 AHCTF1Q8WYP5 2266 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 CCDC194A0A1B0GVG4 234 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 DCLK1O15075 740 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 GPR182O15218 404 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 GAS2O43903 313 aaKnown RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 PLA2G6O60733 806 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 OPHN1O60890 802 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 PRDM1O75626 825 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 AKAP3O75969 853 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 PAPSS2O95340 614 aaPredicted RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 URODP06132 367 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 NR3C2P08235 984 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 PDE6AP16499 860 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 ZSCAN20P17040 1043 aaPredicted RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 CR2P20023 1033 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 UBA1P22314 1058 aaKnown RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 MARK3P27448 753 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 HOXA6P31267 233 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 ZNF76P36508 570 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 ADAM17P78536 824 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 NTHL1P78549 312 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 KRT76Q01546 638 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 RHDQ02161 417 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 SEMA3BQ13214 749 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 PTGDRQ13258 359 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 GRM2Q14416 872 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 KARSQ15046 597 aaKnown RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 RALBP1Q15311 655 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 MAPK6Q16659 721 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 TNNI3KQ59H18 835 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 CTR9Q6PD62 1173 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 PCSK4Q6UW60 755 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 TMEM173Q86WV6 379 aaPredicted RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 PALB2Q86YC2 1186 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 ZNF687Q8N1G0 1237 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 HELQQ8TDG4 1101 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 ING5Q8WYH8 240 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 BAP1Q92560 729 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 IRF7Q92985 503 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 CLUAP1Q96AJ1 413 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 ZNF707Q96C28 371 aaPredicted RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 IGSF21Q96ID5 467 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 TRMT61BQ9BVS5 477 aaKnown RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 APOL6Q9BWW8 343 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 MRPL9Q9BYD2 267 aaKnown RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 RHOBTB2Q9BYZ6 727 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 PRKD2Q9BZL6 878 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 GBP3Q9H0R5 595 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 RANBP17Q9H2T7 1088 aaKnown RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 ELAC1Q9H777 363 aaKnown RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 ZNF287Q9HBT7 754 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 LRRC4CQ9HCJ2 640 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 POLMQ9NP87 494 aaPredicted RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 C2orf42Q9NWW7 574 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 ZDHHC7Q9NXF8 308 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 SYNPO2Q9UMS6 1093 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 ST3GAL5Q9UNP4 418 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 SSX2IPQ9Y2D8 614 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 SLC4A4Q9Y6R1 1079 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 FPGT-TNNI3KV9GXZ4 949 aa3.81□□□□□ -1.8
CHD4-209ENST00000542717 BAZ2AQ9UIF9 1905 aaKnown RBP3.81□□□□□ -1.8
CHD4-209ENST00000542717 GOLGA4Q13439 2230 aaKnown RBP3.8□□□□□ -1.8
CHD4-209ENST00000542717 PLXNB3Q9ULL4 1909 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 PTPRCP08575 1304 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 FRMPD4Q14CM0 1322 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 CCDC163A0A0D9SF12 145 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 CARNS1A5YM72 827 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 EXTL3O43909 919 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 ECI2O75521 394 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 CFIP05156 583 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 ENGP17813 658 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 ELAVL4P26378 380 aaKnown RBP3.8□□□□□ -1.8
CHD4-209ENST00000542717 GDI1P31150 447 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 KPNA1P52294 538 aaPredicted RBP3.8□□□□□ -1.8
CHD4-209ENST00000542717 SP2Q02086 613 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 SEMG2Q02383 582 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 NFATC3Q12968 1075 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 TTF1Q15361 905 aaPredicted RBP3.8□□□□□ -1.8
CHD4-209ENST00000542717 KRTAP21-3Q3LHN1 58 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 PREPLQ4J6C6 727 aaPredicted RBP3.8□□□□□ -1.8
CHD4-209ENST00000542717 DGKKQ5KSL6 1271 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 HIST2H2BCQ6DN03 193 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 TTBK2Q6IQ55 1244 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 PDXDC2PQ6P474 469 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 ATG14Q6ZNE5 492 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 CYFIP1Q7L576 1253 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 PIP4P1Q86T03 277 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 MARCH9Q86YJ5 346 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 GLYCTKQ8IVS8 523 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 WWC1Q8IX03 1113 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 PDCD7Q8N8D1 485 aaKnown RBP3.8□□□□□ -1.8
CHD4-209ENST00000542717 SYTL5Q8TDW5 730 aaPredicted RBP3.8□□□□□ -1.8
CHD4-209ENST00000542717 CSGALNACT1Q8TDX6 532 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 TBC1D5Q92609 795 aa3.8□□□□□ -1.8
CHD4-209ENST00000542717 ZBTB10Q96DT7 871 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms