RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 SIAH1Q8IUQ4 282 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 TNFRSF25Q93038 417 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 MRIQ9BWK5 157 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 AGO4Q9HCK5 861 aaKnown RBP10.95□□□□□ -0.66
TOP3A-208ENST00000542570 EHD2Q9NZN4 543 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 HESX1Q9UBX0 185 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 C5P01031 1676 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 CAPN9O14815 690 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 TLR3O15455 904 aaKnown RBP10.95□□□□□ -0.66
TOP3A-208ENST00000542570 PRKCBP05771 671 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 ADCYAP1R1P41586 468 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 MDM2Q00987 491 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-208ENST00000542570 SCFD2Q8WU76 684 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 CEP63Q96MT8 703 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 SELENOSQ9BQE4 189 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 ACP6Q9NPH0 428 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 AGPAT3Q9NRZ7 376 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 TAF1P21675 1872 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 ZNF18P17022 549 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 RARRES1P49788 294 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 BFSP1Q12934 665 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 TTC19Q6DKK2 380 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 PPP4R3CPQ6ZMV5 832 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 CYP26B1Q9NR63 512 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 PDGFCQ9NRA1 345 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 PIN4Q9Y237 131 aaKnown RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 PRRC2BQ5JSZ5 2229 aaKnown RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 ASB14A6NK59 587 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 ATP1A1P05023 1023 aaKnown RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 MCM3P25205 808 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 MTM1Q13496 603 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 SMAD1Q15797 465 aaKnown RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 OR6B2Q6IFH4 312 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 CPA5Q8WXQ8 436 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 MS4A14Q96JA4 679 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 JPH2Q9BR39 696 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 NACA2Q9H009 215 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 KCNG1Q9UIX4 513 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 SPDYE16A6NNV3 312 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 FMO5P49326 533 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 ORC2Q13416 577 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 KCTD16Q68DU8 428 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 SPOPLQ6IQ16 392 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 CCDC60Q8IWA6 550 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 MSANTD4Q8NCY6 345 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 MAGOHBQ96A72 148 aaKnown RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 DUSP9Q99956 384 aaKnown RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 FAM118BQ9BPY3 351 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 CALN1Q9BXU9 219 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 SETD4Q9NVD3 440 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 KLHL11Q9NVR0 708 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 CEP72Q9P209 647 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 PCSK1NQ9UHG2 260 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 TRPA1O75762 1119 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 PDGFRBP09619 1106 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 ZSCAN20P17040 1043 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 ADORA2AP29274 412 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 SARSP49591 514 aaKnown RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 PAN2Q504Q3 1202 aaKnown RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 ZNF667Q5HYK9 610 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 KRT39Q6A163 491 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 CHST13Q8NET6 341 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 C7orf43Q8WVR3 580 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 CCDC94Q9BW85 323 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 EPB41L5Q9HCM4 733 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 KCNK9Q9NPC2 374 aa10.94□□□□□ -0.66
TOP3A-208ENST00000542570 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.94□□□□□ -0.66
TOP3A-208ENST00000542570 F5H423 210 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 BUB1BO60566 1050 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 USP2O75604 605 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 TUBB4AP04350 444 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 KLRC1P26715 233 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 HIRAP54198 1017 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 ERVK-24P63145 666 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 BEX3Q00994 111 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 ZNF699Q32M78 642 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 FKBP1CQ5VVH2 108 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 ABI1Q8IZP0 508 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 C4orf32Q8N8J7 132 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 CCDC26Q8TAB7 109 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 RABGGTAQ92696 567 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 FAM193BQ96PV7 902 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 MIS12Q9H081 205 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 NGRNQ9NPE2 291 aaKnown RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 CAPN11Q9UMQ6 739 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 MYH2Q9UKX2 1941 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 EVI5O60447 810 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 GBP2P32456 591 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 UGCGQ16739 394 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 CATSPERGQ6ZRH7 1159 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 APBB1IPQ7Z5R6 666 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 RAET1EQ8TD07 263 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 NEK9Q8TD19 979 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 DHX38Q92620 1227 aaKnown RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 KIF12Q96FN5 646 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 PARK7Q99497 189 aaKnown RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 POLR3CQ9BUI4 534 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 LACRTQ9GZZ8 138 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 RANBP17Q9H2T7 1088 aaKnown RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 ZWILCHQ9H900 591 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms