RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PPATQ06203 517 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 MTMR1Q13613 665 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 TNFAIP1Q13829 316 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 GLYCTKQ8IVS8 523 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 CD302Q8IX05 232 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 METTL13Q8N6R0 699 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 C1orf131Q8NDD1 294 aaKnown RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 RDM1Q8NG50 284 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 CASKIN2Q8WXE0 1202 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 HVCN1Q96D96 273 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 CCDC97Q96F63 343 aaPredicted RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 RUFY1Q96T51 708 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 ISCUQ9H1K1 167 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 SLITRK6Q9H5Y7 841 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 NOC2LQ9Y3T9 749 aaKnown RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 PFASO15067 1338 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 ASTN2O75129 1339 aaPredicted RBP7.1□□□□□ -1.27
PTPRO-208ENST00000542557 A6NNZ2 444 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 DDX39AO00148 427 aaKnown RBP7.1□□□□□ -1.27
PTPRO-208ENST00000542557 CEP104O60308 925 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 SFNP31947 248 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 JAK3P52333 1124 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 NCKAP1LP55160 1127 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 MRPS25P82663 173 aaKnown RBP7.1□□□□□ -1.27
PTPRO-208ENST00000542557 CXCL9Q07325 125 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 TUBB8Q3ZCM7 444 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 EPC2Q52LR7 807 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 IQCKQ8N0W5 287 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 CTNNBL1Q8WYA6 563 aaPredicted RBP7.1□□□□□ -1.27
PTPRO-208ENST00000542557 TEPSINQ96N21 525 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 TAF1DQ9H5J8 278 aaPredicted RBP7.1□□□□□ -1.27
PTPRO-208ENST00000542557 MYOZ2Q9NPC6 264 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 AMFRQ9UKV5 643 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 PPP1R9AQ9ULJ8 1098 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 NFU1Q9UMS0 254 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 DOCK1Q14185 1865 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 ANKRD62A6NC57 917 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 DPEP1P16444 411 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 YWHABP31946 246 aaKnown RBP7.1□□□□□ -1.27
PTPRO-208ENST00000542557 HSPA9P38646 679 aaKnown RBP7.1□□□□□ -1.27
PTPRO-208ENST00000542557 VAMP7P51809 220 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 ZNF280AP59817 542 aaPredicted RBP7.1□□□□□ -1.27
PTPRO-208ENST00000542557 KRT76Q01546 638 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 RASA3Q14644 834 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 CLUL1Q15846 466 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 NBPF9Q3BBW0 867 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 CIAPIN1Q6FI81 312 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 PHLDB3Q6NSJ2 640 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 XRRA1Q6P2D8 792 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 DAAM2Q86T65 1068 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 XXYLT1Q8NBI6 393 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 ZIM3Q96PE6 472 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 CARD9Q9H257 536 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 ANKEF1Q9NU02 776 aa7.1□□□□□ -1.27
PTPRO-208ENST00000542557 EMSYQ7Z589 1322 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 ZSCAN5CA6NGD5 496 aaPredicted RBP7.09□□□□□ -1.27
PTPRO-208ENST00000542557 TMCO5BA8MYB1 307 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 WDR64B1ANS9 1081 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 CTNND1O60716 968 aaKnown RBP7.09□□□□□ -1.27
PTPRO-208ENST00000542557 ALAS1P13196 640 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 PSMC5P62195 406 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 ERVK-9P63128 1117 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 SKOR1P84550 965 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 EN1Q05925 392 aaPredicted RBP7.09□□□□□ -1.27
PTPRO-208ENST00000542557 PGM5Q15124 567 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 PPP2R5EQ16537 467 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 CFAP58Q5T655 872 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 LRRC31Q6UY01 552 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 RHOT2Q8IXI1 618 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 SLC35G2Q8TBE7 412 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 SEC14L1Q92503 715 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 AGPAT1Q99943 283 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 HINFPQ9BQA5 517 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 PDCD2LQ9BRP1 358 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 GOLPH3Q9H4A6 298 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 HSPBP1Q9NZL4 362 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 IGSF9BQ9UPX0 1349 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 ESYT3A0FGR9 886 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 TESPA1A2RU30 521 aaPredicted RBP7.09□□□□□ -1.27
PTPRO-208ENST00000542557 TULP2O00295 520 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 DDX3YO15523 660 aaKnown RBP7.09□□□□□ -1.27
PTPRO-208ENST00000542557 BUB1BO60566 1050 aaPredicted RBP7.09□□□□□ -1.27
PTPRO-208ENST00000542557 FAM153BP0C7A2 387 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 TNFAIP3P21580 790 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 RPS12P25398 132 aaKnown RBP7.09□□□□□ -1.27
PTPRO-208ENST00000542557 ECHS1P30084 290 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 RPS6P62753 249 aaKnown RBP7.09□□□□□ -1.27
PTPRO-208ENST00000542557 ENPEPQ07075 957 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 SPP2Q13103 211 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 FAM153CQ494X1 144 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 C1orf220Q5T0J3 134 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 EMC10Q5UCC4 262 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 C11orf63Q6NUN7 778 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 LRIG3Q6UXM1 1119 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 HAUS6Q7Z4H7 955 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 MAATS1Q7Z4T9 603 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 KLHL7Q8IXQ5 586 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 SLC16A10Q8TF71 515 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 IFT81Q8WYA0 676 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 CCDC43Q96MW1 224 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms