RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ARHGAP28Q9P2N2 729 aa25.46■■□□□ 1.67
HOMER3-205ENST00000542541 GCNT3O95395 438 aa25.45■■□□□ 1.67
HOMER3-205ENST00000542541 EIF4BP23588 611 aaKnown RBP25.45■■□□□ 1.67
HOMER3-205ENST00000542541 NMT1P30419 496 aaKnown RBP25.45■■□□□ 1.67
HOMER3-205ENST00000542541 ZNF658Q5TYW1 1059 aaPredicted RBP25.45■■□□□ 1.67
HOMER3-205ENST00000542541 TMEM161BQ8NDZ6 487 aa25.45■■□□□ 1.67
HOMER3-205ENST00000542541 KCNN1Q92952 543 aa25.45■■□□□ 1.67
HOMER3-205ENST00000542541 OSMRQ99650 979 aa25.45■■□□□ 1.67
HOMER3-205ENST00000542541 TMEM134Q9H6X4 195 aa25.45■■□□□ 1.67
HOMER3-205ENST00000542541 SLC39A2Q9NP94 309 aa25.45■■□□□ 1.67
HOMER3-205ENST00000542541 K7ERI5 159 aa25.45■■□□□ 1.66
HOMER3-205ENST00000542541 KIF20AO95235 890 aa25.45■■□□□ 1.66
HOMER3-205ENST00000542541 PARNO95453 639 aaKnown RBP25.45■■□□□ 1.66
HOMER3-205ENST00000542541 MGAT3Q09327 533 aa25.45■■□□□ 1.66
HOMER3-205ENST00000542541 STK4Q13043 487 aa25.45■■□□□ 1.66
HOMER3-205ENST00000542541 PCBP1Q15365 356 aaKnown RBP eCLIP25.45■■□□□ 1.66
HOMER3-205ENST00000542541 LRRC8DQ7L1W4 858 aa25.45■■□□□ 1.66
HOMER3-205ENST00000542541 HPS3Q969F9 1004 aa25.45■■□□□ 1.66
HOMER3-205ENST00000542541 KIFC3Q9BVG8 833 aa25.45■■□□□ 1.66
HOMER3-205ENST00000542541 PRKAG2Q9UGJ0 569 aa25.45■■□□□ 1.66
HOMER3-205ENST00000542541 SQORQ9Y6N5 450 aa25.45■■□□□ 1.66
HOMER3-205ENST00000542541 DENND3A2RUS2 1198 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 INO80B-WBP1J3KQ70 363 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 BIN1O00499 593 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 KIAA0355O15063 1070 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 DARSP14868 501 aaKnown RBP25.44■■□□□ 1.66
HOMER3-205ENST00000542541 GTF2BQ00403 316 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 MORC3Q14149 939 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 MAPK6Q16659 721 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 SASS6Q6UVJ0 657 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 USP38Q8NB14 1042 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 HVCN1Q96D96 273 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 CDHR5Q9HBB8 845 aa25.44■■□□□ 1.66
HOMER3-205ENST00000542541 PRDM5Q9NQX1 630 aaPredicted RBP25.44■■□□□ 1.66
HOMER3-205ENST00000542541 STRN3Q13033 797 aa25.43■■□□□ 1.66
HOMER3-205ENST00000542541 ADGRA3Q8IWK6 1321 aa25.43■■□□□ 1.66
HOMER3-205ENST00000542541 EIF3DO15371 548 aaKnown RBP eCLIP25.42■■□□□ 1.66
HOMER3-205ENST00000542541 EVI5O60447 810 aa25.42■■□□□ 1.66
HOMER3-205ENST00000542541 SFPQP23246 707 aaKnown RBP eCLIP25.42■■□□□ 1.66
HOMER3-205ENST00000542541 ISM2Q6H9L7 571 aa25.42■■□□□ 1.66
HOMER3-205ENST00000542541 PPP1R12CQ9BZL4 782 aa25.42■■□□□ 1.66
HOMER3-205ENST00000542541 IQCF3P0C7M6 154 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 PPP1R2P41236 205 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 KIAA0895Q8NCT3 520 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 STRA6Q9BX79 667 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 PRMT7Q9NVM4 692 aaPredicted RBP25.41■■□□□ 1.66
HOMER3-205ENST00000542541 TBX20Q9UMR3 447 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 EXOC7Q9UPT5 735 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 PPP1R37O75864 691 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 TIMP1P01033 207 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 MYBP10242 640 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 RAG1P15918 1043 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 MBTD1Q05BQ5 628 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 NCBP1Q09161 790 aaKnown RBP25.41■■□□□ 1.66
HOMER3-205ENST00000542541 STIM1Q13586 685 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 ZC2HC1CQ53FD0 456 aaPredicted RBP25.41■■□□□ 1.66
HOMER3-205ENST00000542541 FBXO47Q5MNV8 452 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 TRAF7Q6Q0C0 670 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 EPM2AIP1Q7L775 607 aaPredicted RBP25.41■■□□□ 1.66
HOMER3-205ENST00000542541 MYOCDQ8IZQ8 938 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 ZNF507Q8TCN5 953 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 TMEM40Q8WWA1 233 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 PRIMPOLQ96LW4 560 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 FZD8Q9H461 694 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 TMEM206Q9H813 350 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 MINDY3Q9H8M7 445 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 GDAQ9Y2T3 454 aa25.41■■□□□ 1.66
HOMER3-205ENST00000542541 MYH11P35749 1972 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 UBE4BO95155 1302 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 RPS6KA5O75582 802 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 ERLIN2O94905 339 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 CASP5P51878 434 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 FAM187BQ17R55 369 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 COBLL1Q53SF7 1204 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 DPF3Q92784 378 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 ACCSQ96QU6 501 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 FGFBP2Q9BYJ0 223 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 CCDC113Q9H0I3 377 aa25.4■■□□□ 1.66
HOMER3-205ENST00000542541 TRIM43BA6NCK2 446 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 GPR182O15218 404 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 PRKCBP05771 671 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 CYP2C18P33260 490 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 NLRP12P59046 1061 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 ZSCAN23Q3MJ62 389 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 L1TD1Q5T7N2 865 aaKnown RBP25.39■■□□□ 1.66
HOMER3-205ENST00000542541 PPP4R3CPQ6ZMV5 832 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 TSHZ1Q6ZSZ6 1077 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 FAM43BQ6ZT52 329 aaPredicted RBP25.39■■□□□ 1.66
HOMER3-205ENST00000542541 CATSPER4Q7RTX7 472 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 C7orf61Q8IZ16 206 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 GUF1Q8N442 669 aaKnown RBP25.39■■□□□ 1.66
HOMER3-205ENST00000542541 MLKLQ8NB16 471 aa25.39■■□□□ 1.66
HOMER3-205ENST00000542541 TRIM43Q96BQ3 446 aaPredicted RBP25.39■■□□□ 1.66
HOMER3-205ENST00000542541 TNRC18O15417 2968 aaPredicted RBP25.38■■□□□ 1.65
HOMER3-205ENST00000542541 UMODL1Q5DID0 1318 aa25.38■■□□□ 1.65
HOMER3-205ENST00000542541 ACKR2O00590 384 aa25.38■■□□□ 1.65
HOMER3-205ENST00000542541 CSDE1O75534 798 aaKnown RBP25.38■■□□□ 1.65
HOMER3-205ENST00000542541 PRPF6O94906 941 aaKnown RBP25.38■■□□□ 1.65
HOMER3-205ENST00000542541 BMT2Q1RMZ1 405 aa25.38■■□□□ 1.65
HOMER3-205ENST00000542541 MAP4K3Q8IVH8 894 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms