RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ARIH1Q9Y4X5 557 aaPredicted RBP17.46■□□□□ 0.39
VPS33A-206ENST00000542310 PCDHGC5Q9Y5F6 944 aa17.46■□□□□ 0.39
VPS33A-206ENST00000542310 BTBD18B2RXH4 712 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 DCXO43602 365 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 DTNBO60941 627 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 PLPP4Q5VZY2 271 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 TMEM184AQ6ZMB5 413 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 KSR1Q8IVT5 923 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 MTRQ99707 1265 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 EIF2AK1Q9BQI3 630 aaKnown RBP17.45■□□□□ 0.38
VPS33A-206ENST00000542310 ENTPD7Q9NQZ7 604 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 RGL1Q9NZL6 768 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 BARX2Q9UMQ3 279 aaPredicted RBP17.45■□□□□ 0.38
VPS33A-206ENST00000542310 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 LIMCH1Q9UPQ0 1083 aa17.45■□□□□ 0.38
VPS33A-206ENST00000542310 SLITRK3O94933 977 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 CENPBP07199 599 aaPredicted RBP17.44■□□□□ 0.38
VPS33A-206ENST00000542310 CYP4A11Q02928 519 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 LAMTOR4Q0VGL1 99 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 ORC2Q13416 577 aaPredicted RBP17.44■□□□□ 0.38
VPS33A-206ENST00000542310 KCNC3Q14003 757 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 CTTNQ14247 550 aaKnown RBP17.44■□□□□ 0.38
VPS33A-206ENST00000542310 MXD4Q14582 209 aaPredicted RBP17.44■□□□□ 0.38
VPS33A-206ENST00000542310 SAFBQ15424 915 aaKnown RBP eCLIP17.44■□□□□ 0.38
VPS33A-206ENST00000542310 XKR9Q5GH70 373 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 GLB1LQ6UWU2 654 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 RBM23Q86U06 439 aaKnown RBP17.44■□□□□ 0.38
VPS33A-206ENST00000542310 FERMT3Q86UX7 667 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 ZNF579Q8NAF0 562 aaKnown RBP17.44■□□□□ 0.38
VPS33A-206ENST00000542310 PRPF31Q8WWY3 499 aaKnown RBP17.44■□□□□ 0.38
VPS33A-206ENST00000542310 PGBD4Q96DM1 585 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 HSD17B14Q9BPX1 270 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 LLPHQ9BRT6 129 aaKnown RBP17.44■□□□□ 0.38
VPS33A-206ENST00000542310 TTC12Q9H892 705 aaPredicted RBP17.44■□□□□ 0.38
VPS33A-206ENST00000542310 ANKEF1Q9NU02 776 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 HCN4Q9Y3Q4 1203 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 CNTNAP2Q9UHC6 1331 aa17.44■□□□□ 0.38
VPS33A-206ENST00000542310 PRR33A8MZF0 331 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 DGAT1O75907 488 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 SEC24BO95487 1268 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 PBX3P40426 434 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 ALDH7A1P49419 539 aaKnown RBP17.43■□□□□ 0.38
VPS33A-206ENST00000542310 BCAR1P56945 870 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 POU5F1BQ06416 359 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 SMC1AQ14683 1233 aaKnown RBP17.43■□□□□ 0.38
VPS33A-206ENST00000542310 IFNLR1Q8IU57 520 aaPredicted RBP17.43■□□□□ 0.38
VPS33A-206ENST00000542310 VN1R2Q8NFZ6 395 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 TMEM143Q96AN5 459 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 CCDC51Q96ER9 411 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 TMEM169Q96HH4 297 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 MTMR9Q96QG7 549 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 STK39Q9UEW8 545 aa17.43■□□□□ 0.38
VPS33A-206ENST00000542310 TDRD15B5MCY1 1934 aaKnown RBP17.43■□□□□ 0.38
VPS33A-206ENST00000542310 PER2O15055 1255 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 AXLP30530 894 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 HMGN5P82970 282 aaKnown RBP17.42■□□□□ 0.38
VPS33A-206ENST00000542310 TFDP1Q14186 410 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 BMS1Q14692 1282 aaKnown RBP17.42■□□□□ 0.38
VPS33A-206ENST00000542310 NOMO2Q5JPE7 1267 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 TPH2Q8IWU9 490 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 RNF149Q8NC42 400 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 SUSD6Q92537 303 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 NFKBIZQ9BYH8 718 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 XPNPEP1Q9NQW7 623 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 TBC1D13Q9NVG8 400 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 USP15Q9Y4E8 981 aaPredicted RBP17.42■□□□□ 0.38
VPS33A-206ENST00000542310 PCDHB2Q9Y5E7 798 aa17.42■□□□□ 0.38
VPS33A-206ENST00000542310 WNT7AO00755 349 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 ZC3H11AO75152 810 aaKnown RBP eCLIP17.41■□□□□ 0.38
VPS33A-206ENST00000542310 OFD1O75665 1012 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 ERLIN2O94905 339 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 SRGAP2CP0DJJ0 459 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 HERC4Q5GLZ8 1057 aaPredicted RBP17.41■□□□□ 0.38
VPS33A-206ENST00000542310 TMC7Q7Z402 723 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 MRPL10Q7Z7H8 261 aaKnown RBP17.41■□□□□ 0.38
VPS33A-206ENST00000542310 CNNM3Q8NE01 707 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 URGCPQ8TCY9 931 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 CASP10Q92851 521 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 LPPQ93052 612 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 C8orf76Q96K31 380 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 ZSCAN31Q96LW9 406 aaPredicted RBP17.41■□□□□ 0.38
VPS33A-206ENST00000542310 CCDC43Q96MW1 224 aaKnown RBP17.41■□□□□ 0.38
VPS33A-206ENST00000542310 FOXP1Q9H334 677 aaPredicted RBP17.41■□□□□ 0.38
VPS33A-206ENST00000542310 MINDY3Q9H8M7 445 aa17.41■□□□□ 0.38
VPS33A-206ENST00000542310 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
VPS33A-206ENST00000542310 BMP2KQ9NSY1 1161 aaPredicted RBP17.41■□□□□ 0.38
VPS33A-206ENST00000542310 FAM86C2PA6NEL3 165 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 HIDE1A8MVS5 230 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 LOC730098B7Z3J9 87 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 XRCC6P12956 609 aaKnown RBP eCLIP17.4■□□□□ 0.38
VPS33A-206ENST00000542310 HOXB8P17481 243 aaPredicted RBP17.4■□□□□ 0.38
VPS33A-206ENST00000542310 NCLP19338 710 aaKnown RBP17.4■□□□□ 0.38
VPS33A-206ENST00000542310 HOXA11P31270 313 aaPredicted RBP17.4■□□□□ 0.38
VPS33A-206ENST00000542310 TXKP42681 527 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 RARRES1P49788 294 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 FOSBP53539 338 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 PTENP60484 403 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 GIT2Q14161 759 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 CBX2Q14781 532 aaPredicted RBP17.4■□□□□ 0.38
VPS33A-206ENST00000542310 ANKRD54Q6NXT1 300 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms