RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ZNF589Q86UQ0 364 aaPredicted RBP11.13□□□□□ -0.63
CHFR-220ENST00000541817 PALB2Q86YC2 1186 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 GLYCTKQ8IVS8 523 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 CMASQ8NFW8 434 aaPredicted RBP11.13□□□□□ -0.63
CHFR-220ENST00000541817 ZCCHC14Q8WYQ9 949 aaKnown RBP11.13□□□□□ -0.63
CHFR-220ENST00000541817 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
CHFR-220ENST00000541817 OSBPL6Q9BZF3 934 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 SMOC1Q9H4F8 434 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 NDRG2Q9UN36 371 aaKnown RBP11.13□□□□□ -0.63
CHFR-220ENST00000541817 PCDHB15Q9Y5E8 787 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 AKAP13Q12802 2813 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 CHURC1-FNTBB4DL54 471 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 TEX28O15482 410 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 CYTH3O43739 400 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 FNTBP49356 437 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 CLCN3P51790 818 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 ACTR2P61160 394 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 STPG1Q5TH74 334 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 IQCA1Q86XH1 822 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 ZNF280BQ86YH2 543 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 METTL13Q8N6R0 699 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 GPRASP2Q96D09 838 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 MRPL9Q9BYD2 267 aaKnown RBP11.12□□□□□ -0.63
CHFR-220ENST00000541817 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 NT5C3AQ9H0P0 336 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 MRPL17Q9NRX2 175 aaKnown RBP11.12□□□□□ -0.63
CHFR-220ENST00000541817 TBC1D13Q9NVG8 400 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.12□□□□□ -0.632e-7■■■■□ 26
CHFR-220ENST00000541817 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 SLC9A2Q9UBY0 812 aa11.12□□□□□ -0.63
CHFR-220ENST00000541817 SHISA7A6NL88 538 aa11.11□□□□□ -0.63
CHFR-220ENST00000541817 FSHRP23945 695 aa11.11□□□□□ -0.63
CHFR-220ENST00000541817 NLRP11P59045 1033 aaKnown RBP11.11□□□□□ -0.63
CHFR-220ENST00000541817 RNASELQ05823 741 aaKnown RBP11.11□□□□□ -0.63
CHFR-220ENST00000541817 MTMR1Q13613 665 aa11.11□□□□□ -0.63
CHFR-220ENST00000541817 HEATR6Q6AI08 1181 aaKnown RBP11.11□□□□□ -0.63
CHFR-220ENST00000541817 PLPPR4Q7Z2D5 763 aa11.11□□□□□ -0.63
CHFR-220ENST00000541817 FAM160A2Q8N612 972 aaPredicted RBP11.11□□□□□ -0.63
CHFR-220ENST00000541817 C12orf50Q8NA57 414 aaPredicted RBP11.11□□□□□ -0.63
CHFR-220ENST00000541817 PHKBQ93100 1093 aa11.11□□□□□ -0.63
CHFR-220ENST00000541817 FAM126AQ9BYI3 521 aaPredicted RBP11.11□□□□□ -0.63
CHFR-220ENST00000541817 ARRDC1-AS1Q9H2J1 176 aa11.11□□□□□ -0.63
CHFR-220ENST00000541817 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
CHFR-220ENST00000541817 JPH1Q9HDC5 661 aaPredicted RBP11.11□□□□□ -0.63
CHFR-220ENST00000541817 HEBP1Q9NRV9 189 aa11.11□□□□□ -0.63
CHFR-220ENST00000541817 UBIAD1Q9Y5Z9 338 aa11.11□□□□□ -0.63
CHFR-220ENST00000541817 DSPP15924 2871 aaKnown RBP11.11□□□□□ -0.63
CHFR-220ENST00000541817 ADAMTS20P59510 1910 aa11.11□□□□□ -0.63
CHFR-220ENST00000541817 WDFY3Q8IZQ1 3526 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 A0A0U1RQF3 1178 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 PALM3A6NDB9 673 aaPredicted RBP11.1□□□□□ -0.63
CHFR-220ENST00000541817 ZBTB42B2RXF5 422 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 DDX39AO00148 427 aaKnown RBP11.1□□□□□ -0.63
CHFR-220ENST00000541817 MEIS2O14770 477 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 NCAM2O15394 837 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 HBP1O60381 514 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 DDHD2O94830 711 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 GLUD1P00367 558 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 MAGEA9P43362 315 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 AFF1P51825 1210 aaKnown RBP11.1□□□□□ -0.63
CHFR-220ENST00000541817 NRLP54845 237 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 SATB1Q01826 763 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 ADCY1Q08828 1119 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 HDAC1Q13547 482 aaPredicted RBP11.1□□□□□ -0.63
CHFR-220ENST00000541817 GRASPQ7Z6J2 395 aaPredicted RBP11.1□□□□□ -0.63
CHFR-220ENST00000541817 GATA6Q92908 595 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 TNPO1Q92973 898 aaKnown RBP11.1□□□□□ -0.63
CHFR-220ENST00000541817 LSM14BQ9BX40 385 aaKnown RBP11.1□□□□□ -0.63
CHFR-220ENST00000541817 PLA2G2FQ9BZM2 168 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 CEP295Q9C0D2 2601 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 DMXL2Q8TDJ6 3036 aa11.1□□□□□ -0.63
CHFR-220ENST00000541817 GREB1Q4ZG55 1949 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 MTCL1Q9Y4B5 1905 aaKnown RBP11.09□□□□□ -0.63
CHFR-220ENST00000541817 PNMA6FA0A0J9YX94 578 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 BACH1O14867 736 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 C22orf31O95567 290 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 ATP4AP20648 1035 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 RPS9P46781 194 aaKnown RBP11.09□□□□□ -0.63
CHFR-220ENST00000541817 NOVA1P51513 510 aaKnown RBP11.09□□□□□ -0.63
CHFR-220ENST00000541817 LIMK1P53667 647 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 UBE2SQ16763 222 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 NOMO2Q5JPE7 1267 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 IFIT1BQ5T764 474 aaKnown RBP11.09□□□□□ -0.63
CHFR-220ENST00000541817 KIAA1211LQ6NV74 962 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 LRRC71Q8N4P6 559 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 CUL5Q93034 780 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 CDHR1Q96JP9 859 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 B3GALT6Q96L58 329 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 RPS6KC1Q96S38 1066 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 SCNM1Q9BWG6 230 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 PRKD2Q9BZL6 878 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 ADAMTS10Q9H324 1103 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 RNF41Q9H4P4 317 aaPredicted RBP11.09□□□□□ -0.63
CHFR-220ENST00000541817 RIOX1Q9H6W3 641 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 HELLSQ9NRZ9 838 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 CDH7Q9ULB5 785 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 WASF3Q9UPY6 502 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 AKT3Q9Y243 479 aa11.09□□□□□ -0.63
CHFR-220ENST00000541817 IGF2RP11717 2491 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms