RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 TOGARAM2Q6ZUX3 1019 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 LDHAP00338 332 aaKnown RBP16.29■□□□□ 0.2
HMGA2-210ENST00000541363 CDC27P30260 824 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 HPCAP84074 193 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 GPR162Q16538 588 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 ADCK5Q3MIX3 580 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 TRIM62Q9BVG3 475 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 BBS2Q9BXC9 721 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 SYNDIG1Q9H7V2 258 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 APOA4P06727 396 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 PIK3R5Q8WYR1 880 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 ANAPC7Q9UJX3 599 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 PCDHB8Q9UN66 801 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 TTLL1O95922 423 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 CALB1P05937 261 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 OLFML2BQ68BL8 750 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 RFWD2Q8NHY2 731 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 SDR42E1Q8WUS8 393 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 FHDC1Q9C0D6 1143 aaPredicted RBP16.28■□□□□ 0.2
HMGA2-210ENST00000541363 DTNAQ9Y4J8 743 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 POTEFA5A3E0 1075 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 AKAP10O43572 662 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 MTERF2Q49AM1 385 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 FAM162AQ96A26 154 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 PSD3Q9NYI0 1048 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 TFDP2Q14188 446 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 PANX2Q96RD6 677 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 TRIM13O60858 407 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 MTRF1O75570 445 aaKnown RBP16.28■□□□□ 0.2
HMGA2-210ENST00000541363 NDUFA10O95299 355 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 CCDC149Q6ZUS6 474 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 RTL3Q8N8U3 475 aaKnown RBP16.28■□□□□ 0.2
HMGA2-210ENST00000541363 ATP5JP18859 108 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 PPP2R2AP63151 447 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 HEATR6Q6AI08 1181 aaKnown RBP16.28■□□□□ 0.2
HMGA2-210ENST00000541363 ARL8AQ96BM9 186 aa16.28■□□□□ 0.2
HMGA2-210ENST00000541363 MRPL1Q9BYD6 325 aaKnown RBP16.28■□□□□ 0.2
HMGA2-210ENST00000541363 ZBTB7BO15156 539 aaPredicted RBP16.27■□□□□ 0.2
HMGA2-210ENST00000541363 MAGOHP61326 146 aaKnown RBP16.27■□□□□ 0.2
HMGA2-210ENST00000541363 LRRC41Q15345 812 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 SH3BP5LQ7L8J4 393 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 NUP93Q8N1F7 819 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 CACNA2D2Q9NY47 1150 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 SYTL3Q4VX76 610 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 KRT78Q8N1N4 520 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 IKBKBO14920 756 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 DTX3LQ8TDB6 740 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 COQ7Q99807 217 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 MAP3K13O43283 966 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 DLGAP3O95886 979 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 ZBED6P86452 979 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 PPM1NQ8N819 430 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 CENPTQ96BT3 561 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 HES6Q96HZ4 224 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 VPS50Q96JG6 964 aa16.27■□□□□ 0.2
HMGA2-210ENST00000541363 GNAT1P11488 350 aa16.27■□□□□ 0.19
HMGA2-210ENST00000541363 BTDP43251 543 aa16.27■□□□□ 0.19
HMGA2-210ENST00000541363 C16orf89Q6UX73 402 aa16.27■□□□□ 0.19
HMGA2-210ENST00000541363 ABCB6Q9NP58 842 aa16.27■□□□□ 0.19
HMGA2-210ENST00000541363 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.19
HMGA2-210ENST00000541363 PGM1P36871 562 aa16.27■□□□□ 0.19
HMGA2-210ENST00000541363 ROR1Q01973 937 aa16.27■□□□□ 0.19
HMGA2-210ENST00000541363 IDI1Q13907 227 aa16.27■□□□□ 0.19
HMGA2-210ENST00000541363 CNGA2Q16280 664 aa16.27■□□□□ 0.19
HMGA2-210ENST00000541363 MAGI1Q96QZ7 1491 aaPredicted RBP16.27■□□□□ 0.19
HMGA2-210ENST00000541363 SPTLC3Q9NUV7 552 aa16.27■□□□□ 0.19
HMGA2-210ENST00000541363 PPP3CCP48454 512 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 PSMC6P62333 389 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 RAD51Q06609 339 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 CYLC2Q14093 348 aaPredicted RBP16.26■□□□□ 0.19
HMGA2-210ENST00000541363 KLHL24Q6TFL4 600 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 DDX50Q9BQ39 737 aaKnown RBP16.26■□□□□ 0.19
HMGA2-210ENST00000541363 PIDD1Q9HB75 910 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 MAN1B1Q9UKM7 699 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 RNF103O00237 685 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 MB21D1Q8N884 522 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 CABLES1Q8TDN4 633 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 RMDN1Q96DB5 314 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 TRPM2O94759 1503 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 PSMA4P25789 261 aaKnown RBP16.26■□□□□ 0.19
HMGA2-210ENST00000541363 IRX1P78414 480 aaPredicted RBP16.26■□□□□ 0.19
HMGA2-210ENST00000541363 KRT31Q15323 416 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 MAPRE1Q15691 268 aaKnown RBP16.26■□□□□ 0.19
HMGA2-210ENST00000541363 SCN4BQ8IWT1 228 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 CMTM5Q96DZ9 223 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 ETNK1Q9HBU6 452 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 EXOSC4Q9NPD3 245 aaKnown RBP16.26■□□□□ 0.19
HMGA2-210ENST00000541363 BTBD18B2RXH4 712 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 K7ERI5 159 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 BIRC5O15392 142 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 SCNN1DP51172 638 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 FBXO31Q5XUX0 539 aaPredicted RBP16.26■□□□□ 0.19
HMGA2-210ENST00000541363 TLR2O60603 784 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 CLCN6P51797 869 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 TNFAIP2Q03169 654 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms