RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 DPY19L2Q6NUT2 758 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 XRRA1Q6P2D8 792 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 USP50Q70EL3 339 aaPredicted RBP18.67■□□□□ 0.58
SPIDR-227ENST00000541342 MREGQ8N565 214 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 NSUN6Q8TEA1 469 aaKnown RBP18.67■□□□□ 0.58
SPIDR-227ENST00000541342 GANQ9H2C0 597 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 IKZF4Q9H2S9 585 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 PARVGQ9HBI0 331 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 BTBD7Q9P203 1132 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 ZMYM2Q9UBW7 1377 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 ATP1A2P50993 1020 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 ARID5AQ03989 594 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 LBX2Q6XYB7 198 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 DAW1Q8N136 415 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 FAM133AQ8N9E0 248 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 KCND2Q9NZV8 630 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 ADAMTS1Q9UHI8 967 aa18.67■□□□□ 0.58
SPIDR-227ENST00000541342 ARHGEF35A5YM69 484 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 NR2F2P24468 414 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 QARSP47897 775 aaKnown RBP18.66■□□□□ 0.58
SPIDR-227ENST00000541342 GUCY2FP51841 1108 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 RNASE9P60153 205 aaKnown RBP18.66■□□□□ 0.58
SPIDR-227ENST00000541342 MAPK7Q13164 816 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 ZC2HC1CQ53FD0 456 aaPredicted RBP18.66■□□□□ 0.58
SPIDR-227ENST00000541342 TMEM59LQ9UK28 342 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 A0A0G2JLL6 359 aaPredicted RBP18.66■□□□□ 0.58
SPIDR-227ENST00000541342 TMEM150BA6NC51 233 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 GUCY2CP25092 1073 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 LIG3P49916 1009 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 GADL1Q6ZQY3 521 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 PRRT2Q7Z6L0 340 aaPredicted RBP18.66■□□□□ 0.58
SPIDR-227ENST00000541342 RNPC3Q96LT9 517 aaKnown RBP18.66■□□□□ 0.58
SPIDR-227ENST00000541342 RUFY1Q96T51 708 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 NUCKS1Q9H1E3 243 aaKnown RBP18.66■□□□□ 0.58
SPIDR-227ENST00000541342 AIPL1Q9NZN9 384 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 PDXKO00764 312 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 PPATQ06203 517 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 KIAA0753Q2KHM9 967 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 PADI6Q6TGC4 694 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 GPRASP2Q96D09 838 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 ODF2LQ9ULJ1 636 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 TELO2Q9Y4R8 837 aa18.66■□□□□ 0.58
SPIDR-227ENST00000541342 RAD51CO43502 376 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 ECHS1P30084 290 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 PAK2Q13177 524 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 RAPGEF1Q13905 1077 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 KSR1Q8IVT5 923 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 SH2D3AQ9BRG2 576 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 TGFB1I1O43294 461 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 HIP1RO75146 1068 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 GNA14O95837 355 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 RARRES1P49788 294 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 EMC10Q5UCC4 262 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 ICE2Q659A1 982 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 KDM7AQ6ZMT4 941 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 MICALL1Q8N3F8 863 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 GOLPH3Q9H4A6 298 aa18.65■□□□□ 0.58
SPIDR-227ENST00000541342 TYW1Q9NV66 732 aaKnown RBP18.65■□□□□ 0.58
SPIDR-227ENST00000541342 LYPLA2O95372 231 aa18.64■□□□□ 0.58
SPIDR-227ENST00000541342 ZBTB48P10074 688 aaPredicted RBP18.64■□□□□ 0.58
SPIDR-227ENST00000541342 KCNA2P16389 499 aa18.64■□□□□ 0.58
SPIDR-227ENST00000541342 ENOX2Q16206 610 aaKnown RBP18.64■□□□□ 0.58
SPIDR-227ENST00000541342 DNAAF5Q86Y56 855 aa18.64■□□□□ 0.58
SPIDR-227ENST00000541342 ANKRD13AQ8IZ07 590 aa18.64■□□□□ 0.58
SPIDR-227ENST00000541342 USP38Q8NB14 1042 aa18.64■□□□□ 0.58
SPIDR-227ENST00000541342 DBR1Q9UK59 544 aaKnown RBP18.64■□□□□ 0.58
SPIDR-227ENST00000541342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.64■□□□□ 0.58
SPIDR-227ENST00000541342 CETN3O15182 167 aa18.64■□□□□ 0.57
SPIDR-227ENST00000541342 EIF3DO15371 548 aaKnown RBP eCLIP18.64■□□□□ 0.57
SPIDR-227ENST00000541342 YWHABP31946 246 aaKnown RBP18.64■□□□□ 0.57
SPIDR-227ENST00000541342 GUCY1A3Q02108 690 aa18.64■□□□□ 0.57
SPIDR-227ENST00000541342 FSTL1Q12841 308 aa18.64■□□□□ 0.57
SPIDR-227ENST00000541342 CFAP58Q5T655 872 aa18.64■□□□□ 0.57
SPIDR-227ENST00000541342 ZNF720Q7Z2F6 126 aa18.64■□□□□ 0.57
SPIDR-227ENST00000541342 ERO1BQ86YB8 467 aa18.64■□□□□ 0.57
SPIDR-227ENST00000541342 CD302Q8IX05 232 aa18.64■□□□□ 0.57
SPIDR-227ENST00000541342 ZC3H15Q8WU90 426 aaKnown RBP18.64■□□□□ 0.57
SPIDR-227ENST00000541342 WDR64B1ANS9 1081 aa18.64■□□□□ 0.57
SPIDR-227ENST00000541342 KRT76Q01546 638 aa18.64■□□□□ 0.57
SPIDR-227ENST00000541342 KCTD19Q17RG1 926 aaPredicted RBP18.64■□□□□ 0.57
SPIDR-227ENST00000541342 MAEAQ7L5Y9 396 aa18.64■□□□□ 0.57
SPIDR-227ENST00000541342 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.64■□□□□ 0.57
SPIDR-227ENST00000541342 SPDYE5A6NIY4 337 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 CALUO43852 315 aaPredicted RBP18.63■□□□□ 0.57
SPIDR-227ENST00000541342 ACTN1P12814 892 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 JAK3P52333 1124 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 CNTN2Q02246 1040 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 IRF2BP2Q7Z5L9 587 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 PROCA1Q8NCQ7 364 aaPredicted RBP18.63■□□□□ 0.57
SPIDR-227ENST00000541342 SEL1LQ9UBV2 794 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 CLIC2O15247 247 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 PTK2Q05397 1052 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 KLHL30Q0D2K2 578 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 ODR4Q5SWX8 454 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 NLRX1Q86UT6 975 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 FAM178BQ8IXR5 827 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 CHST13Q8NET6 341 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 FAM107BQ9H098 131 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 R3HDMLQ9H3Y0 253 aa18.63■□□□□ 0.57
SPIDR-227ENST00000541342 AKAP3O75969 853 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms