RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 STRCQ7RTU9 1775 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 GAKO14976 1311 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 TMEM150BA6NC51 233 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 PDXKO00764 312 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 FAM13AO94988 1023 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 IL1R1P14778 569 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 ZNF76P36508 570 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 PPATQ06203 517 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 KIAA1755Q5JYT7 1200 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 AGBL2Q5U5Z8 902 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 NEK9Q8TD19 979 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 BORCS6Q96GS4 357 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 RGS16O15492 202 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 UPP2O95045 317 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 FTLP02792 175 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 PYGMP11217 842 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 GCFC2P16383 781 aaKnown RBP11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 VCAM1P19320 739 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 TNFAIP3P21580 790 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 RPA1P27694 616 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 ELF3P78545 371 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 MTMR3Q13615 1198 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 PREPLQ4J6C6 727 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 SIAH1Q8IUQ4 282 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 ATG4AQ8WYN0 398 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 C8orf37Q96NL8 207 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 CRAMP1Q96RY5 1269 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 VAV3Q9UKW4 847 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 PNMA3Q9UL41 463 aa11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 BZW2Q9Y6E2 419 aaKnown RBP11.2□□□□□ -0.62
CDC42SE1-207ENST00000540998 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 C5orf60A6NFR6 353 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 GCLMP48507 274 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 EPC2Q52LR7 807 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 KIAA0825Q8IV33 1275 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 CCDC197Q8NCU1 140 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 C1orf54Q8WWF1 131 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 WDR18Q9BV38 432 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 TRIM7Q9C029 511 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 UBE2TQ9NPD8 197 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 FAM114A2Q9NRY5 505 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 INTS9Q9NV88 658 aaKnown RBP11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 FGFR1OP2Q9NVK5 253 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 TBK1Q9UHD2 729 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 SUFUQ9UMX1 484 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 GOLGA8IPA6NC78 632 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 CCT8L1PA6NM43 557 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 GOLGA8JA6NMD2 632 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 hCG_1984214I3L0E3 225 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 DLATP10515 647 aaKnown RBP11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 COMTP21964 271 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 ELF1P32519 619 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 MAPK7Q13164 816 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 BARGINQ6ZT62 677 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 ZNF713Q8N859 430 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 SEC14L1Q92503 715 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 PABPC3Q9H361 631 aaKnown RBP11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 PITPNM2Q9BZ72 1349 aa11.19□□□□□ -0.62
CDC42SE1-207ENST00000540998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 CES2O00748 559 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 UBOX5O94941 541 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 CFBP00751 764 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 FERP16591 822 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 NF2P35240 595 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 PTGIRP43119 386 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 MYO1EQ12965 1108 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 TRAPPC3LQ5T215 181 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 C10orf76Q5T2E6 689 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 C1orf131Q8NDD1 294 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 LMBR1Q8WVP7 490 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 PCDHB18PQ96TA0 734 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 TACO1Q9BSH4 297 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 CDCA7Q9BWT1 371 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 NOD2Q9HC29 1040 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 ZBTB21Q9ULJ3 1066 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 SGPL1O95470 568 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 PAEPP09466 180 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 CHKAP35790 457 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 RBM5P52756 815 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 MYL7Q01449 175 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 FAM182AQ5T1J6 154 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 CCDC137Q6PK04 289 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 RPUSD2Q8IZ73 545 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 SYCE1Q8N0S2 351 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 DBNDD1Q9H9R9 158 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 LRRC4BQ9NT99 713 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 STK38LQ9Y2H1 464 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 ATAD5Q96QE3 1844 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 PPIP5K2O43314 1243 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 EXOC3O60645 756 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 ATP6V1G2O95670 118 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 TMEM253P0C7T8 217 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 PAX7P23759 505 aa11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 ZYXQ15942 572 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-207ENST00000540998 ODR4Q5SWX8 454 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms