RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TMEM265A0A087WTH1 108 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 PVALEFA0A1B0GWK0 134 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 PPP1R3GB7ZBB8 358 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 IKBKBO14920 756 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 GPR32O75388 356 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.53
ATL3-204ENST00000540699 CYP11B2P19099 503 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 POLGP54098 1239 aaPredicted RBP11.71□□□□□ -0.53
ATL3-204ENST00000540699 CDC42EP1Q00587 391 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 KMT5BQ4FZB7 885 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 ZNF658Q5TYW1 1059 aaPredicted RBP11.71□□□□□ -0.53
ATL3-204ENST00000540699 FAM43BQ6ZT52 329 aaPredicted RBP11.71□□□□□ -0.53
ATL3-204ENST00000540699 UNC13DQ70J99 1090 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 RPUSD2Q8IZ73 545 aaKnown RBP11.71□□□□□ -0.53
ATL3-204ENST00000540699 AOPEPQ8N6M6 819 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 SYT2Q8N9I0 419 aaPredicted RBP11.71□□□□□ -0.53
ATL3-204ENST00000540699 USP38Q8NB14 1042 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 MAFAQ8NHW3 353 aaPredicted RBP11.71□□□□□ -0.53
ATL3-204ENST00000540699 MYLIPQ8WY64 445 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 DNAJC19Q96DA6 116 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 MED15Q96RN5 788 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 MAP7D2Q96T17 732 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 CELF4Q9BZC1 486 aaKnown RBP11.71□□□□□ -0.53
ATL3-204ENST00000540699 LRRC27Q9C0I9 530 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 ADAMTS10Q9H324 1103 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 SUGCTQ9HAC7 445 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 ATP6V0A4Q9HBG4 840 aa11.71□□□□□ -0.53
ATL3-204ENST00000540699 TRANK1O15050 2925 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 FRMD3A2A2Y4 597 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 ARHGEF35A5YM69 484 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 AP5Z1O43299 807 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 VTNP04004 478 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 CTSHP09668 335 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 ARL2P36404 184 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 DNM2P50570 870 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 GPC3P51654 580 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 CRYBB1P53674 252 aaPredicted RBP11.7□□□□□ -0.54
ATL3-204ENST00000540699 ASIC1P78348 528 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 LPIN1Q14693 890 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 COBLL1Q53SF7 1204 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 PLEKHG4Q58EX7 1191 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 ARSHQ5FYA8 562 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 FBXO47Q5MNV8 452 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 TMEM240Q5SV17 173 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 RASIP1Q5U651 963 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 PSRC1Q6PGN9 363 aaPredicted RBP11.7□□□□□ -0.54
ATL3-204ENST00000540699 PADI6Q6TGC4 694 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 MCPH1Q8NEM0 835 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 TCP11Q8WWU5 503 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 DDX12PQ92771 950 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 PDLIM2Q96JY6 352 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 CCDC43Q96MW1 224 aaKnown RBP11.7□□□□□ -0.54
ATL3-204ENST00000540699 OSBPL7Q9BZF2 842 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 HSD3B7Q9H2F3 369 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 BHMT2Q9H2M3 363 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 SUCLA2Q9P2R7 463 aaPredicted RBP11.7□□□□□ -0.54
ATL3-204ENST00000540699 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 TTC3P53804 2025 aa11.7□□□□□ -0.54
ATL3-204ENST00000540699 M0QZ92 97 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 ASAP2O43150 1006 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 USO1O60763 962 aaKnown RBP11.69□□□□□ -0.54
ATL3-204ENST00000540699 DNAJB2P25686 324 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 ERCC5P28715 1186 aaPredicted RBP11.69□□□□□ -0.54
ATL3-204ENST00000540699 NLRP11P59045 1033 aaKnown RBP11.69□□□□□ -0.54
ATL3-204ENST00000540699 POU5F1BQ06416 359 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 TMEM62Q0P6H9 643 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 DHX8Q14562 1220 aaKnown RBP11.69□□□□□ -0.54
ATL3-204ENST00000540699 TSHZ1Q6ZSZ6 1077 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 C1orf186Q6ZWK4 172 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 ZNF410Q86VK4 478 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 SMYD4Q8IYR2 804 aaPredicted RBP11.69□□□□□ -0.54
ATL3-204ENST00000540699 ENOX1Q8TC92 643 aaKnown RBP11.69□□□□□ -0.54
ATL3-204ENST00000540699 PRPF31Q8WWY3 499 aaKnown RBP11.69□□□□□ -0.54
ATL3-204ENST00000540699 PSPC1Q8WXF1 523 aaKnown RBP11.69□□□□□ -0.54
ATL3-204ENST00000540699 HERVK_113Q902F9 699 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 TMEM143Q96AN5 459 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.69□□□□□ -0.54
ATL3-204ENST00000540699 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 KCND2Q9NZV8 630 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 AKT3Q9Y243 479 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 GDAQ9Y2T3 454 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 COL4A3BPQ9Y5P4 624 aa11.69□□□□□ -0.54
ATL3-204ENST00000540699 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.68□□□□□ -0.54
ATL3-204ENST00000540699 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.68□□□□□ -0.54
ATL3-204ENST00000540699 SMTNL1A8MU46 457 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 BECN2A8MW95 431 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 BAIAP3O94812 1187 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 ACRP10323 421 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 GHRP10912 638 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 FOSL2P15408 326 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 GLRA2P23416 452 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 GUCY2CP25092 1073 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 MYL5Q02045 173 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 LAMTOR4Q0VGL1 99 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 MXD4Q14582 209 aaPredicted RBP11.68□□□□□ -0.54
ATL3-204ENST00000540699 KIZQ2M2Z5 673 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 TCTN1Q2MV58 587 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 RINT1Q6NUQ1 792 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 CNKSR3Q6P9H4 555 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 SARM1Q6SZW1 724 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms