RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 EIF3BP55884 814 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 PPP4CP60510 307 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 ADCY1Q08828 1119 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 SNRNP27Q8WVK2 155 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 DHRS1Q96LJ7 313 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 RMDN2Q96LZ7 410 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 AGBL1Q96MI9 1066 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 BLZF1Q9H2G9 400 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 INIPQ9NRY2 104 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 TMEM59LQ9UK28 342 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 DAAM1Q9Y4D1 1078 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 DAGLAQ9Y4D2 1042 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 PCDHAC2Q9Y5I4 1007 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 TRIM49BA6NDI0 452 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 BHMG1C9JSJ3 638 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 VCAM1P19320 739 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 VARSP26640 1264 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 EIF4A3P38919 411 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 MAGEA1P43355 309 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 METAP2P50579 478 aaKnown RBP eCLIP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 SESN3P58005 492 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 FKBP1AP62942 108 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 KCTD19Q17RG1 926 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 OLFML2BQ68BL8 750 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 ANKLE1Q8NAG6 615 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 ATP11CQ8NB49 1132 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 SH3RF3Q8TEJ3 882 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 DHTKD1Q96HY7 919 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 DDX50Q9BQ39 737 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 NACA2Q9H009 215 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 NAPBQ9H115 298 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 GAKO14976 1311 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 STK36Q9NRP7 1315 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 SMIM22K7EJ46 135 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 PJA2O43164 708 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 AKR1B10O60218 316 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 ENTPD5O75356 428 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 LCA5LO95447 670 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 FTCDO95954 541 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 HOXD12P35452 270 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 MLH1P40692 756 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 IFI35P80217 286 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 HPCAP84074 193 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 OCRLQ01968 901 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 LMNB2Q03252 620 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 LIN52Q52LA3 116 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 RILPL1Q5EBL4 403 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 RSBN1LQ6PCB5 846 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 AGGF1Q8N302 714 aaeCLIP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 LRRC8CQ8TDW0 803 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 SCG3Q8WXD2 468 aaKnown RBP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 PCMTD1Q96MG8 357 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 MIS12Q9H081 205 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 LRMDAQ9H2I8 198 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 DPH5Q9H2P9 285 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 EXOC1Q9NV70 894 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 STOML1Q9UBI4 398 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 NUB1Q9Y5A7 615 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 TRIM43BA6NCK2 446 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 TCP11X1B4DZS4 312 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 ZNF213O14771 459 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 DAPK3O43293 454 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 UBTFL6P0CB48 400 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 EEF1GP26641 437 aaKnown RBP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 CRKP46108 304 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 SH3BGRP55822 239 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 RTP1P59025 263 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 ALX1Q15699 326 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 WASHC2DQ5SRD0 308 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 FAM47EQ6ZV65 393 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 RNF25Q96BH1 459 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 PGM2Q96G03 612 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 CRNKL1Q9BZJ0 848 aaKnown RBP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 NACAP1Q9BZK3 213 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 DCLRE1BQ9H816 532 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 PRKAG3Q9UGI9 489 aa10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 PACSIN2Q9UNF0 486 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-243ENST00000540387 TLDC2A0PJX2 215 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 PALMO75781 387 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 ZCCHC18P0CG32 403 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 PRCPP42785 496 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 RHBDL3P58872 404 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 CNGA2Q16280 664 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 SLC44A4Q53GD3 710 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 SNX30Q5VWJ9 437 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 CIAPIN1Q6FI81 312 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 APOBEC3HQ6NTF7 200 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 DIS3L2Q8IYB7 885 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 SH3TC2Q8TF17 1288 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 TGFBRAP1Q8WUH2 860 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 SYMPKQ92797 1274 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 TEKT1Q969V4 418 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 GMLQ99445 158 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 AZI2Q9H6S1 392 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 DCP1AQ9NPI6 582 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 TXLNGQ9NUQ3 528 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 GDAQ9Y2T3 454 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 FER1L6Q2WGJ9 1857 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 CYP2D7A0A087X1C5 515 aa10.18□□□□□ -0.78
CTNNA1-243ENST00000540387 MINDY4BA8MYZ0 360 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms