RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 IQCA1LA6NCM1 817 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 SLC16A4O15374 487 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 TLR2O60603 784 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 EXOC3O60645 756 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 UCHL3P15374 230 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 EDNRBP24530 442 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 COPB2P35606 906 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 SP2Q02086 613 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 PRKCEQ02156 737 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 KIF5AQ12840 1032 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 FSTL1Q12841 308 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 RAPGEF1Q13905 1077 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 TDRD12Q587J7 1177 aaKnown RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 KRT222Q8N1A0 295 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 KIFAP3Q92845 792 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 HVCN1Q96D96 273 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 TSPAN18Q96SJ8 248 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 PAIP2Q9BPZ3 127 aaKnown RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 IFIH1Q9BYX4 1025 aaKnown RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 C17orf75Q9HAS0 396 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 IRAK4Q9NWZ3 460 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 AIPL1Q9NZN9 384 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 GCNT4Q9P109 453 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 SEPT9Q9UHD8 586 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 FBXL5Q9UKA1 691 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 TELO2Q9Y4R8 837 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 PCDHA13Q9Y5I0 950 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 SOWAHBA6NEL2 793 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 DGAT1O75907 488 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 ACTN1P12814 892 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 OSBPP22059 807 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 CALRP27797 417 aaKnown RBP10.51□□□□□ -0.73
CLIP1-212ENST00000540304 SMTNP53814 917 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 DMP1Q13316 513 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-212ENST00000540304 MOGSQ13724 837 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 ELF2Q15723 593 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 ASIC2Q16515 512 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 ASTE1Q2TB18 679 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-212ENST00000540304 SEPT14Q6ZU15 432 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 FAM133AQ8N9E0 248 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 MCPH1Q8NEM0 835 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 ATL2Q8NHH9 583 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 LACRTQ9GZZ8 138 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 MYO6Q9UM54 1294 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 CCDC169A6NNP5 214 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 EFCAB8A8MWE9 144 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 RBAK-RBAKDNI3L0D1 243 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 FMO5P49326 533 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 BFSP1Q12934 665 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 XKR3Q5GH77 459 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 CYFIP1Q7L576 1253 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 TXLNBQ8N3L3 684 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 SIX2Q9NPC8 291 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 CYP26B1Q9NR63 512 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 CDC23Q9UJX2 597 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 EXOC7Q9UPT5 735 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 FHOD1Q9Y613 1164 aa10.51□□□□□ -0.73
CLIP1-212ENST00000540304 TADA3O75528 432 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 ATG7O95352 703 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 KRT13P13646 458 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 NPTX2P47972 431 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 RTP1P59025 263 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 LDLRAD1Q5T700 205 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 PNMA8AQ86V59 439 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-212ENST00000540304 TMEM161BQ8NDZ6 487 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 SPIRE2Q8WWL2 714 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 SPAG5Q96R06 1193 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 MPHOSPH6Q99547 160 aaKnown RBP10.5□□□□□ -0.73
CLIP1-212ENST00000540304 ATP6V0A4Q9HBG4 840 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 KMT5AQ9NQR1 393 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 ZNF302Q9NR11 478 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 SYNGAP1Q96PV0 1343 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 GOLGA6CA6NDK9 693 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 GOLGA6BA6NDN3 693 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 GOLGA6DP0CG33 693 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 UBA1P22314 1058 aaKnown RBP10.5□□□□□ -0.73
CLIP1-212ENST00000540304 GFPT1Q06210 699 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-212ENST00000540304 KLHL30Q0D2K2 578 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 GPR162Q16538 588 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 ERCC6LQ2NKX8 1250 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 GPAT2Q6NUI2 795 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 INTS8Q75QN2 995 aaKnown RBP10.5□□□□□ -0.73
CLIP1-212ENST00000540304 PACS2Q86VP3 889 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 XXYLT1Q8NBI6 393 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 UBXN4Q92575 508 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 CBWD1Q9BRT8 395 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 NTPCRQ9BSD7 190 aaKnown RBP10.5□□□□□ -0.73
CLIP1-212ENST00000540304 EPC1Q9H2F5 836 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 TXNRD2Q9NNW7 524 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 PDLIM7Q9NR12 457 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 GOLGA6AQ9NYA3 693 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 RBPJLQ9UBG7 517 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 TBX20Q9UMR3 447 aa10.5□□□□□ -0.73
CLIP1-212ENST00000540304 MAFBQ9Y5Q3 323 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-212ENST00000540304 TISP43B9A030 160 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 MAPK13O15264 365 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 ECEL1O95672 775 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 OATP04181 439 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms