RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 MMP19Q99542 508 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 ZHX3Q9H4I2 956 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 EPB41L4AQ9HCS5 686 aaPredicted RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 CAPN6Q9Y6Q1 641 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 FAM237AA0A1B0GTK4 181 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 ZSCAN5CA6NGD5 496 aaPredicted RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 ATP4AP20648 1035 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 STAT3P40763 770 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 ALX1Q15699 326 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 UHMK1Q8TAS1 419 aaKnown RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 DTNBP1Q96EV8 351 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 BCORQ6W2J9 1755 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 PPP1R3GB7ZBB8 358 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 H0Y3Z8 333 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 PRLRP16471 622 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 HSD17B3P37058 310 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 PRCPP42785 496 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 EIF3BP55884 814 aaKnown RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 AMPD3Q01432 767 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 PTPROQ16827 1216 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 ANKRD20A2Q5SQ80 823 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 SH2D4BQ5SQS7 431 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 ANKRD20A1Q5TYW2 823 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 ANKRD20A3Q5VUR7 823 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 CCDC174Q6PII3 467 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 VPS36Q86VN1 386 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 MDM1Q8TC05 714 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 LPAR1Q92633 364 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 EZH1Q92800 747 aaPredicted RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 ZBED3Q96IU2 234 aaPredicted RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 NLRC4Q9NPP4 1024 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 MTRF1LQ9UGC7 380 aaKnown RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 REXO2Q9Y3B8 237 aaKnown RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 SIPA1L3O60292 1781 aaPredicted RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 KIF13BQ9NQT8 1826 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 SBF1O95248 1867 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 TBC1D12O60347 775 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 DPYDQ12882 1025 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 QPCTQ16769 361 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 AGBL2Q5U5Z8 902 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 MAEAQ7L5Y9 396 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 TRIM74Q86UV6 250 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 TRIM73Q86UV7 250 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 RASGRP4Q8TDF6 673 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 ARHGEF2Q92974 986 aaKnown RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 TATDN2Q93075 761 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 CNOT6LQ96LI5 555 aaKnown RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 TSG101Q99816 390 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 DDX23Q9BUQ8 820 aaKnown RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 DLGAP2Q9P1A6 1054 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 SKIP12755 728 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 ALDH3A1P30838 453 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 PBX1P40424 430 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 CWF19L1Q69YN2 538 aaKnown RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 CCDC25Q86WR0 208 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 LRRC47Q8N1G4 583 aaKnown RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 ANKRD42Q8N9B4 389 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 CASKIN2Q8WXE0 1202 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.36□□□□□ -0.91
DDB1-217ENST00000540166 STMN2Q93045 179 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 CALML4Q96GE6 196 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 TEPSINQ96N21 525 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 DNAJC7Q99615 494 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 DCP1AQ9NPI6 582 aaPredicted RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 FBXO40Q9UH90 709 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 RASAL2Q9UJF2 1139 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 RNF225M0QZC1 329 aaPredicted RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 ORC4O43929 436 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 RARBP10826 455 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 SCG2P13521 617 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 KRT13P13646 458 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 NOL9Q5SY16 702 aaKnown RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 SLC44A5Q8NCS7 719 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 DDX27Q96GQ7 796 aaKnown RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 MOV10L1Q9BXT6 1211 aaKnown RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 THAP9Q9H5L6 903 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 PANK4Q9NVE7 773 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 ATP11BQ9Y2G3 1177 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 USH1CQ9Y6N9 552 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 CEP290O15078 2479 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 PRPF3O43395 683 aaKnown RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 RTN3O95197 1032 aaPredicted RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 FESP07332 822 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 CYP2D6P10635 497 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 PRKAR2AP13861 404 aaKnown RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 EN2P19622 333 aaPredicted RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 RAB27AP51159 221 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 ERVK-9P63128 1117 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 RAPGEF1Q13905 1077 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 LACTB2Q53H82 288 aaPredicted RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 NUGGCQ68CJ6 796 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 CD302Q8IX05 232 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 U2AF1L4Q8WU68 220 aaKnown RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 GPKOWQ92917 476 aaPredicted RBP eCLIP9.36□□□□□ -0.91
DDB1-217ENST00000540166 ZNF512BQ96KM6 892 aaPredicted RBP9.36□□□□□ -0.91
DDB1-217ENST00000540166 RAB17Q9H0T7 212 aa9.36□□□□□ -0.91
DDB1-217ENST00000540166 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms